Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0792 ATGAAAGAAGGTGGTGGGAGAAAGCAGGGTGCAGCTTCACCCTGTGCTGCATGCAAGCTTCTCAGAAGAAGGTGTGCTCAAGATTGTGTTTTTGCTCCATATTTTCCAGCAGATGAACCTCAAAAGTTTGCAAATGTGCACAAGGTCTTTGGTGCTAGCAATGTCAACAAAATGCTTCAGGACCTACCAACGCATCAAAGAGGGGATGCAGTGAGTAGCATGGTGTACGAGGCTAATGCCAGAGTCCGAGACCCAGTTTATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATGTGCTACAGACCCAATTGGCCCTGGCCCAGGCTGAGGTAGCCCACCTCAGGGTGAGGCAGAATAGGTGTTTTTCCAATCATGGGCCTAGACCTACAAGCCCAACCAATACCTTGGACTCACATGTCAAGCCTATTTTTGACATGGACATGGTGGTGGACCAGGCCAGCTATGGGAGTTCAATGTGGTCATGA 495 0.4949 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPTHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRCFSNHGPRPTSPTNTLDSHVKPIFDMDMVVDQASYGSSMWS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0792 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 134 - -
Vra10g0792 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 134 - -
Vra10g0792 164 Coils Coil 93 120 - -
Vra10g0792 164 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Vra10g0792 164 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0792 Vra-Chr10 13973687 13977276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0792 1 164 AS2 family AT1G31320 72.316 1.24e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vra10g0792 LOB 1.2e-43 No_clan