Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0785 ATGGGTTGTATGCGTATATCAGTAGTAGCAGTGTTGTGTGCATTAGTGATGAATGGAGTGTCGTGTGCAGATTTGAGTTCTACTTACTACCACACAACATGCCCTCAACTATATTCCATTGTCTATGGAGTCATCAACCACGCTTACATCACTGATCCCCGCATTGCTGCCAACCTCATCAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGCGATGGATCAGTTTTGCTGAATAACACTGATAGCATAGAAAGCGAACAAGATGCAGCTCCAAATATCAATTCATTAAGGGGTTTGGATGTGGTTAATAACATCAAGACAGCAGTGGAAGATAGTTGTCCAGAGACAGTTTCTTGTGCTGATATTCTTGCCATTGCAGCTGAAGTAGCTTCTGTTCTGGGAGGAGGTCCATCATGGTCAGTTCTATTAGGAAGAAGGGATAGCTTAACAGCAAACAGAACCCTTGCCGAAACAAACCTTCCAGCACCACACTTCACACTTTATCAACTTAAACAATCTTTTGCTGCTCAAGGTCTCAACACTACTGATTTAGTTTCACTCTCAGGTGCACATACGTTTGGACAAGCACACTGCAACAATTTCATCGACAGATTATACAATTTCAACTACACTGGAAGTGCTGATCCAACTCTGAATAGCACTTACTTGAAAGCATTGAGTGAGATATGCCCAGTAGATGCTACTGAGGATAACCTCGCCGATTTGGATCTGATAACTCCTAATCAATTCGATAACAAATACTACTCCAATCTTCAATACCAGAATGGGCTGCTTCAGAGCGACCAAGAACTCTTCTCCACTTCTGATGCTGATACCACTGACCTTGTGAATAGCTTCAGCAGTGACCAAAGTGTTTTCTTTGAGAACTTTGTAGTGTCAATGATAAAAATGGGTAGTATTTCAGTGCTGACAGAAGATGAAGGAGAAATTCGGTTGCAGTGTAATTTGGTGAATGAAGACTCGTCTGGTTTAGTTGGTGTGGCATCCAAGGCTCCAAAACAGAAGCTCGCAGCATATGAACACATTATGAGGATACAAAGAAAAGTTTTGTGGGGTTGGGGTGCAGATGGGAGGAAAATAGCTTGGGTTAAATGGAAAACTTTATGTAAATCAAAGAGGGAGGGAGAAGCTTGGATGATAGAAAGTGTGGACAGAGAGAATCTTGTTGGTGGAATAATCTCCGAAAGAACAGCCAAAATGGGTTTTATGCGTGTAGTACTAATGGCAGTGTTGTGTTCATTTGCTTTGCATGCAGGGTTTTCTGTCACTAATGCTCAGCTTAGTCCTACGTTCTACAGAACAACATGTCCAAATCTATTCAATATTGTGTTTCAAGTCATCTTTCAAGCTTCCACCACCGATCCCCGAATTGGGGCCAGCCTTCTCAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGCGATGGATCAGTTCTGCTGAACAACACTGATAGCATAGAAAGCGAACAAGATGCAGCTCCAAATATCAATTCATTAAGGGGTTTGGATGTGGTCAATAACATCAAGACAGCGGTCGAAAATAGTTGTCCAGGGAGAGTTTCTTGTGCTGATATTCTTGCCATTGCAGCTGAAGTAGGTTCTGTTCTGGGAGGAGGTCCAGGATGGCCAGTTCTATTAGGAAGAAGAGATAGTTTAACAGCAAACAGAACCCTTGCAAATCAAAACCTTCCTGCTCCTTTCTTCAACCTCACTCAACTTAAAGCAGCATTTGCTGTTCAAGGTCTCAACACCACTGATTTAGTTGCACTCTCAGGTGGTCATACTTTTGGAAGAGCTCACTGCAGCACATTCAATAACCGATTATACAACTTCAACAACACTGGAAACCCTGATCCAACTCTGAATACAACTTACTTAGCAACACTGCGTCTGATATGCCCCCAGAACGCAACTGGGAATAACCTCACCAATTTGGACCTGACCACACCTGATCAATTTGATAACAAATACTACTCCAATCTACAGCACCTCAATGGCTTACTTCAGAGCGACCAGGAACTCTTCTCTACTCCTGCTGCTGATACCATTCCCATTGTCAACAGTTTCAGCAGTGACCAAAACGCTTTCTTTGCCAACTTTGTAGCGTCAATGATAAAAATGGGAAATATTGGAGTGCTCACAGGAACTGATGGACAAATTCGCACCCAATGCAATTTTGTGAATGGAAACTCGTTTGGATTAGCTAGTATGGCGTCCAAAGATCCTAAGCAAAACATGGTTTCTCAATCTTAA 2277 0.422 MGCMRISVVAVLCALVMNGVSCADLSSTYYHTTCPQLYSIVYGVINHAYITDPRIAANLIRLHFHDCFVQGCDGSVLLNNTDSIESEQDAAPNINSLRGLDVVNNIKTAVEDSCPETVSCADILAIAAEVASVLGGGPSWSVLLGRRDSLTANRTLAETNLPAPHFTLYQLKQSFAAQGLNTTDLVSLSGAHTFGQAHCNNFIDRLYNFNYTGSADPTLNSTYLKALSEICPVDATEDNLADLDLITPNQFDNKYYSNLQYQNGLLQSDQELFSTSDADTTDLVNSFSSDQSVFFENFVVSMIKMGSISVLTEDEGEIRLQCNLVNEDSSGLVGVASKAPKQKLAAYEHIMRIQRKVLWGWGADGRKIAWVKWKTLCKSKREGEAWMIESVDRENLVGGIISERTAKMGFMRVVLMAVLCSFALHAGFSVTNAQLSPTFYRTTCPNLFNIVFQVIFQASTTDPRIGASLLRLHFHDCFVQGCDGSVLLNNTDSIESEQDAAPNINSLRGLDVVNNIKTAVENSCPGRVSCADILAIAAEVGSVLGGGPGWPVLLGRRDSLTANRTLANQNLPAPFFNLTQLKAAFAVQGLNTTDLVALSGGHTFGRAHCSTFNNRLYNFNNTGNPDPTLNTTYLATLRLICPQNATGNNLTNLDLTTPDQFDNKYYSNLQHLNGLLQSDQELFSTPAADTIPIVNSFSSDQNAFFANFVASMIKMGNIGVLTGTDGQIRTQCNFVNGNSFGLASMASKDPKQNMVSQS* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0785 758 Gene3D Peroxidase, domain 2 572 715 - -
Vra10g0785 758 Gene3D Peroxidase, domain 2 162 305 - -
Vra10g0785 758 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 Pfam Peroxidase 454 699 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PANTHER PEROXIDASE 7 333 - -
Vra10g0785 758 PANTHER PEROXIDASE 414 744 - -
Vra10g0785 758 ProSitePatterns Peroxidases proximal heme-ligand signature. 594 604 IPR019793 -
Vra10g0785 758 PRINTS Plant peroxidase signature 444 463 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Plant peroxidase signature 468 488 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Plant peroxidase signature 508 521 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Plant peroxidase signature 527 537 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Plant peroxidase signature 546 561 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Plant peroxidase signature 593 605 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Plant peroxidase signature 652 667 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Plant peroxidase signature 668 685 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Plant peroxidase signature 710 723 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601|GO:0042744
Vra10g0785 758 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vra10g0785 758 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vra10g0785 758 ProSiteProfiles Plant heme peroxidase family profile. 434 736 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 SUPERFAMILY Heme-dependent peroxidases 434 736 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 Gene3D - 29 326 - -
Vra10g0785 758 Gene3D - 439 736 - -
Vra10g0785 758 PRINTS Haem peroxidase superfamily signature 466 480 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Haem peroxidase superfamily signature 528 545 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Haem peroxidase superfamily signature 546 558 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Haem peroxidase superfamily signature 594 609 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PRINTS Haem peroxidase superfamily signature 654 669 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PANTHER PEROXIDASE 72-RELATED 7 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 PANTHER PEROXIDASE 72-RELATED 414 744 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0785 758 CDD secretory_peroxidase 434 735 IPR033905 GO:0004601|GO:0042744
Vra10g0785 758 ProSitePatterns Peroxidases active site signature. 466 477 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0785 Vra-Chr10 13908684 13916225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0785 409 739 Peroxidase AT5G06730 59.215 1.10e-135 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0785 K00430 - vra:106774868 1494.56