Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0784 ATGGGTTCCATGAATGCAGTAGTAGTGACAGTGTTGTGTGCATTTGCGATGCATGCAGGGTTTTTAGTCACTAATGCTCAGCTCAGTCCCACGTTCTACAACGAAACATGTCCAACGCTAAGCGATATTGTCTTTAATGTCATCTCAAATGCTTCCCTCACCGATCCCCGAATTGGTGCCAGTCTCATCAGGCTTCACTTTCATGATTGCTTTGTTCAAGGTTGCGATGGATCAGTTTTGCTGAACAACACTGATAGCATAGAAAGCGAACAAGATGCAGCTCCAAATATCAATTCATTAAGGGGTTTGGATGTGGTTAATAACATCAAGACAGCAGTGGAAGATAGTTGTCCAGAGACAGTTTCTTGTGCTGATATTCTTGCCATTGCAGCTGAAGTAGCTTCTGTTCTGGGAGGTGGTCCATCATGGGATGTTCCATTAGGAAGAAGGGATAGCTTAAACGCAAGTCAAGCTCTTGCAAATCAAAATCTTCCAGCACCCTTCTTCACAGTAGATCAACTCATTTCTTCCTTTGCAGCTCAAGGTCTCAACACCACTGATTTAGTCACTCTCTCAGGTGCTCATACGTTTGGAAGAGCTCGTTGCAGTTTATTCTTAAGCCGATTATACAGCTTCAACGACACTGGAAACCCTGATCCAACTCTAAACACAACTTACTTAGAAACATTGCGTGGGATATGCCCTGAGAATGCAACTGTTGATAACATCACTAATTTAGACCTCAGCACAGCTGATCAATTTGATAACAAATACTATTCGAATCTTCAGGAACTCAATGGCTTGCTTCAGAGCGACCAAGAACTGTTCTCCACTACTGGTGCTGATACCGTTGACCTTGTCAACAGTTTCAGCAGTGACCAAAGTGTTTTCTTTGCCAACTTTGTAGTGTCAATGATAAAAATGGGAAATATTAGTGTGCTGACAGGAACTGATGGAGAAATTCGCACCCAATGTAATTTTGTGAATGGAAACTCGTCCGCAACATTAGCTGGTGTGGCCTCCAAAGATCCTAAACTGAACCTTGTTGCTCAATCTAAGTAA 1062 0.4256 MGSMNAVVVTVLCAFAMHAGFLVTNAQLSPTFYNETCPTLSDIVFNVISNASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDSIESEQDAAPNINSLRGLDVVNNIKTAVEDSCPETVSCADILAIAAEVASVLGGGPSWDVPLGRRDSLNASQALANQNLPAPFFTVDQLISSFAAQGLNTTDLVTLSGAHTFGRARCSLFLSRLYSFNDTGNPDPTLNTTYLETLRGICPENATVDNITNLDLSTADQFDNKYYSNLQELNGLLQSDQELFSTTGADTVDLVNSFSSDQSVFFANFVVSMIKMGNISVLTGTDGEIRTQCNFVNGNSSATLAGVASKDPKLNLVAQSK* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0784 353 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Vra10g0784 353 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Vra10g0784 353 Gene3D - 32 329 - -
Vra10g0784 353 PANTHER PEROXIDASE 72-RELATED 7 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 PANTHER PEROXIDASE 7 337 - -
Vra10g0784 353 Pfam Peroxidase 47 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0784 353 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vra10g0784 353 Gene3D Peroxidase, domain 2 165 308 - -
Vra10g0784 353 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0784 Vra-Chr10 13903924 13908101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0784 21 338 Peroxidase AT5G06730 61.006 6.16e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0784 K00430 - vra:106774868 560.836