Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0782 ATGAATTCCCTTGGTCTCCCTACTTTATGCTGTGTTCTGGTCGTGCTTGGAACACTACACTGCTTCTCCTGTCAACAACTAGATCCATCTTTTTACAATACCACATGCCCAAATGTTTCTTCAATTGTAACTGATGTGCTCTCAAATGTTTCCCAGTCTGATCCTCGTATGCTTGCAAGTCTCATCAGACTCCACTTTCACGACTGTTTTGTTCAGGGGTGTGATGCATCTGTTCTGTTGAACGACACTGATACCATTGTGAGTGAGCAAACTGCAGCGCCAAATAACAACAGCTTACGAGGTTTGGATGTTGTGAATCAGATCAAGACAGCTGTAGAAAATGCTTGTCCTGGGGTTGTCTCCTGTGCTGATATTCTTGCTCTTGCAGCTCAGACATCTTCTCAACTGGCTCTTGGTCCTTCTTGGGAAGTTCTACTGGGAAGAAGGGATAGTTTGACAGCAAATCGAACCCTTGCTAATCTAAACCTTCCTGGTCCTGATTTTACACTCGATCAACTTATTTCCTCGTTTGCTAATCAGAACCTCAGTGTCACTGATCTAGTTGCACTTTCAGGTGCCCATACAATTGGAAAGGCTCAATGCAGATTTTTTGTAAATAGGTTATACAATTTTAGCAGTGGGAACCCAGATCCTATTCTCAACACCACTCTCTTAGAATCATTGCGAGCAATATGTCCCAATGGTGGAGTTGGAACAAATCTCACCAACTTGGACGTAACTACTCCTGAAATATTCGATTCCGAGTACTATTCCAATCTTCAACTTCAAAATGGCCTGCTTCGGAGTGATCAAGAGCTGTTTAGCACAACTGATGCAGAAACTGTTCCCATTGTCAACAGTTACATTGACAATCAAACTCTTTTCTTTCAAGACTTCATAGCGTCAATGATAAGAATGGCCAACATTGGAGTGTTGACAGGATCAGAGGGAGAAATTCGAAAACAGTGCAACTTTGTGAATACATTTGATATCTTTACCATCATAGATCGTCAGAAGATGGAATTGTTATAA 1032 0.4167 MNSLGLPTLCCVLVVLGTLHCFSCQQLDPSFYNTTCPNVSSIVTDVLSNVSQSDPRMLASLIRLHFHDCFVQGCDASVLLNDTDTIVSEQTAAPNNNSLRGLDVVNQIKTAVENACPGVVSCADILALAAQTSSQLALGPSWEVLLGRRDSLTANRTLANLNLPGPDFTLDQLISSFANQNLSVTDLVALSGAHTIGKAQCRFFVNRLYNFSSGNPDPILNTTLLESLRAICPNGGVGTNLTNLDVTTPEIFDSEYYSNLQLQNGLLRSDQELFSTTDAETVPIVNSYIDNQTLFFQDFIASMIRMANIGVLTGSEGEIRKQCNFVNTFDIFTIIDRQKMELL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0782 343 Gene3D Peroxidase, domain 2 164 306 - -
Vra10g0782 343 PANTHER PEROXIDASE 6 333 - -
Vra10g0782 343 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Vra10g0782 343 ProSiteProfiles Plant heme peroxidase family profile. 26 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PANTHER PEROXIDASE 72-RELATED 6 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Vra10g0782 343 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 Gene3D - 31 327 - -
Vra10g0782 343 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0782 343 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0782 Vra-Chr10 13873529 13874995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0782 12 327 Peroxidase AT5G06730 58.044 3.66e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0782 K00430 - gmx:100814455 499.204