Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0781 ATGGTCTGTCTCAGAATTAATACAGTAACACACAAAAACACTCAAGGGGTTAACGTTTTAGGCATGAAAATGAGGTTTCTTTGTGTTGTGGTAACAGCCCTAGTGGTGCTTGGAGGGTTACCCTTTTCCTCAGATGCACAACTAGACCCCTTCTTCTACTTGTGGACTTGTCCACCCGTGCGTCTTGTTGTGTTCAAAGTGGTAGAGAGAGCTTCACAAAAGGATCCTCGTCTGCCTGCCAGTCTCGTCAGGCTTTTCTTTCACGACTGTTTTGTTCAAGGTTGTGATGCATCGATTTTGTTGAACAACACTGCAACGATAGTGAGTGAGCAACAAGCCCGGCCAAACAACAACTCCATAAGAGGTTTGGATGTGGTGAATGACATCAAGACAGCAGTGGAGAATGTTTGTCCCGGCGTTGTTTCTTGTGCAGATATTCTTACTATTGCAGCTGAAGTTTCTTCTATTCTGGCTGGTGGTCCTTTCATCAAATTTCCACTGGGAAGAAGGGATAGTTTAACAGCAAACAGAACACTTGCTGAACAAAACCTTCCTTCTCCTTTCTCCACACTCGATCAACTTAAAGCAGCATTTGCTGTTCAACGTCTTGACACTACTGATCTAGTTGCACTCTCAGGTGCTCATTCATTTGGCAGAGCTCACTGCTTTTTCATTCTTACCCGATTGTACAACTTCAGTGGCACTGGCAGACCCGATCCAACTCTCGACCCTGCTTACGCACAACAATTACGTAATATATGCCCTCAAGGTGGACCAAACAACTTGGTAAATTTTGACCCAACCACTCCTGATAGATTGGACAAAAACTATTACTCCAACCTTCAGGTTAAGAGGGGTTTGCTTCAGAGTGACCAAGAGTTGTTCTCAACACCCGGTGCTGACACCATCCCTCTTGTCAACAGGTTCAGTGCTGACCAAAAGGCTTTCTTTAGCAGCTTTGCCAAATCAATGATAAAAATGGGAAATATCGGTGTTCTCACCGGGAACAGAGGAGAAATAAGAAAACAATGTAATTTTATTAACAGAAGATCTGTTCAAGTTATGCAACCTGTGGCCTCCGAATCAGAGGAGGGTATGGTTAGCTCTATATAA 1113 0.4385 MVCLRINTVTHKNTQGVNVLGMKMRFLCVVVTALVVLGGLPFSSDAQLDPFFYLWTCPPVRLVVFKVVERASQKDPRLPASLVRLFFHDCFVQGCDASILLNNTATIVSEQQARPNNNSIRGLDVVNDIKTAVENVCPGVVSCADILTIAAEVSSILAGGPFIKFPLGRRDSLTANRTLAEQNLPSPFSTLDQLKAAFAVQRLDTTDLVALSGAHSFGRAHCFFILTRLYNFSGTGRPDPTLDPAYAQQLRNICPQGGPNNLVNFDPTTPDRLDKNYYSNLQVKRGLLQSDQELFSTPGADTIPLVNRFSADQKAFFSSFAKSMIKMGNIGVLTGNRGEIRKQCNFINRRSVQVMQPVASESEEGMVSSI* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0781 370 SUPERFAMILY Heme-dependent peroxidases 47 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 121 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 140 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 Gene3D Peroxidase, domain 2 185 327 - -
Vra10g0781 370 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Vra10g0781 370 PANTHER PEROXIDASE FAMILY PROTEIN 26 357 - -
Vra10g0781 370 Gene3D - 52 348 - -
Vra10g0781 370 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Haem peroxidase superfamily signature 141 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 Pfam Peroxidase 66 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 CDD secretory_peroxidase 47 347 IPR033905 GO:0004601|GO:0042744
Vra10g0781 370 PANTHER PEROXIDASE 72-RELATED 26 357 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g0781 370 ProSiteProfiles Plant heme peroxidase family profile. 47 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0781 Vra-Chr10 13869466 13871073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0781 20 370 Peroxidase AT2G38380 53.652 3.25e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0781 K00430 - gmx:112997743 556.214