Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0762 ATGTCCTCCTCTCTCATGCCAAACCCAACCGATCGCTCGCGTGACTCTCACCGCCCAAAGAAGAAGAAGAAATCCCCCGCCAAGCCCCAATCCCACCAAGACCACTCCCACGCCACATGGAAAACCCACGCGCAGCAGAACCTATATTCCTCCAAGCTCCACCAGGCCCTCGCGCGTGTCAACATCTCCGCCGACACGCCCCGCCGTGGCAGGGCCGTCCGTGAGGCCGCCGACAGAGTCCTCGCCGTCGCCGCCCGCGGGAGGACGCGCTGGAGCCGTGCCATCCTCACCAACCGGCTCAAGCTCAAGTTCAGGAAGACACCGCACAGGCGACCCAAGGTGGTTGGCCCGCCCCGCCCCAAGAAGCCCCGCTTCAGCGTCCTCCGTCTCAAGGGAAAAACCCTTCCCTCCGTTCAGCGCAAAGTTAGAGTCCTCGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCCCTTCCGATCATTCTCGAAGAAGCCATCGATTACATACCCGCGCTCGAGATGCAGGTTCGCGCCATGGCGGATCTCGCTCGATTACTCCTGGGCTCCTCCTCTCCCTCTTCCTCTTCTTCCGCCGCCGCATCAACCTCCGCGCCGTCGAGTTGA 621 0.6264 MSSSLMPNPTDRSRDSHRPKKKKKSPAKPQSHQDHSHATWKTHAQQNLYSSKLHQALARVNISADTPRRGRAVREAADRVLAVAARGRTRWSRAILTNRLKLKFRKTPHRRPKVVGPPRPKKPRFSVLRLKGKTLPSVQRKVRVLGRLVPGCRKEPLPIILEEAIDYIPALEMQVRAMADLARLLLGSSSPSSSSSAAASTSAPSS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0762 206 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 6 203 - -
Vra10g0762 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 188 IPR036638 GO:0046983
Vra10g0762 206 CDD bHLH_AtIBH1_like 127 178 IPR044549 GO:0006355
Vra10g0762 206 MobiDBLite consensus disorder prediction 187 206 - -
Vra10g0762 206 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 203 IPR044660 GO:0006355
Vra10g0762 206 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0762 Vra-Chr10 13693152 13694332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0762 37 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 54.802 1.02e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0762 - - gmx:100792237 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0762 10 13693152 13694332 Vra10g0762 10 13693152 13694332 ECH
Vra7g2759 7 47865037 47866535 Vra10g0762 10 13693152 13694332 PCT