Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0732 ATGAGCATGGAAGCTGATGCTGCTACCACTTCACAGTTACCACTAGCCGACACAGACATAAACTGGGACAGGTTGGACAAAACCAAGTTCCACGTCATCGGTGCCGTTCTCTTCACGGCTCAATCAGGCCTGCTTCATCCAACGGCGGTGGTGAAGACACGAATGCAAGTGGCGGGGTCGGAGTCCTGGCACGTGCGAGGAGGAACGTCGGTGCTGGCCCAAATTCTGCGAAGCGATGGCGTTTCGGGAATCTTCAGAGGCTTCGGCACTTCCGCCATTGGTTCAATCCCCGGTAGGGTTCTGGCTCTCACCTCTCTTGAGGTCTCCAAAGACATTGTCCTGAAACACACGCAAGCCACTCGCATTCCAGAAGCTTCTCGTGTTGGCCTCGCTAACGCACTCGCTGGCATGATCTCTAACCTGGTTTCCTGCGTCTACTTCGTGCCCTTGGATGTGATTTGTCAGAGGTTGATGGTGCAGGGTCTTCCTGGGACAGCGTTTTGTAGAGGGCCGTTTGATGTTGTTCGGAAAGTTGTGGAGAATGAGGGGTTTCGTGGTCTGTATAGGGGTTTCGGATTAACGGCGATTACGCAGTCCCCTGCTTCTGCACTTTGGTGGGGTTCATATGCTGCCGCACAACACCTAATTTGGAGTTTGGGCTACAAAGATGATACGGGTAAAAAACCTTCACATGTGGAAATGGTTACAGTTCAGGCTAGTGCTGGGATGGTGGCTGGTGCTTGTTCATCTGTTATCACTACTCCCATAGATACTGTGAAAACACGTCTTCAGGTGATGGACAACTATGGCTCTGAAAGACCATCAGTACTGAAGACAGCAAAGATTCTCCTTAAGGAAGATGGATGGTGGGGATTTTACAGGGGCTTTGGACCAAGATTTTTGAACATGTCACTTTATGGAACAACCATGATTGTTACTTATGAACTGATAAAGAGATTATCGGTTCAATCAAGTTTGAGGTCTTTTACGTAG 993 0.4955 MSMEADAATTSQLPLADTDINWDRLDKTKFHVIGAVLFTAQSGLLHPTAVVKTRMQVAGSESWHVRGGTSVLAQILRSDGVSGIFRGFGTSAIGSIPGRVLALTSLEVSKDIVLKHTQATRIPEASRVGLANALAGMISNLVSCVYFVPLDVICQRLMVQGLPGTAFCRGPFDVVRKVVENEGFRGLYRGFGLTAITQSPASALWWGSYAAAQHLIWSLGYKDDTGKKPSHVEMVTVQASAGMVAGACSSVITTPIDTVKTRLQVMDNYGSERPSVLKTAKILLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQSSLRSFT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0732 330 PANTHER OS01G0329400 PROTEIN 1 323 - -
Vra10g0732 330 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Vra10g0732 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Vra10g0732 330 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 323 - -
Vra10g0732 330 Pfam Mitochondrial carrier protein 35 116 IPR018108 -
Vra10g0732 330 Pfam Mitochondrial carrier protein 131 216 IPR018108 -
Vra10g0732 330 Pfam Mitochondrial carrier protein 237 322 IPR018108 -
Vra10g0732 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 112 IPR018108 -
Vra10g0732 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Vra10g0732 330 Gene3D Mitochondrial carrier domain 123 327 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0732 Vra-Chr10 13344316 13346895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0732 17 320 Chloroplast and Mitochondria Gene Families AT5G15640 49.837 1.02e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0732 K15121 - gmx:112997745 565.459