Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0670 ATGTCCCCCGAGCTATCAAATTCTCCACACTTAGTTCATAGCCAATTCGTTAGATTTATGTTCGTCATAATGGACACCTTGTTCCTTGTGAAGGAAATTTCTGCGTCAATTTTGATTTTCTTGGTGACCCTTTTGTCCATTCGCACACTCTTCAAACGCCGTGGCCGGAAGCTGCCGCCGGGGCCAAGAGGGTGGCCTGTGGTGGGTGCACTTCCTCTTATGGGAAGCATGCCCCATGTGACATTGGCTAATATGGCAAAGAAATATGGATCGGTTATGTACCTAAAAATGGGTAGTAACAACATGGTTGTGGCTTCTACTCCTGCCGCTGCTCGTGCCTTCCTTAAAACCCTTGACCAAAACTTCTCCAATCGGCCTCCAAATGCTGGTGCAACCCACTTGGCTTATGATGCACAGGACATGGTTTTTGCTGAATATGGATCAAGGTGGAAATTGCTGAGGAAACTAAGCAACCTGCACATGCTTGGAGGAAAGGCTCTTGATGAGTGGGGAAAGGTTCGAGAAGAAGAGATGGGGCAGATGCTGGGTAGCATGTACGAGTGTAGCAAGAAGGGTGAAGCTGTGGTGGTGCCTGAGATGCTCACCTACTCTATGGCCAACATGATAGGCCAAGTCATACTCAGTCGTCGAGTGTTCGAGACCAAGGGTTCTGACTCAAACCAGTTCAAGGACATGGTGGTCGAGCTCATGACTGTTGCAGGCTACTTCAACATTGGCGATTTCATACCCTTCTTAGCCAAATTGGACCTTCAAGGCATTCAGCGTGGGATGAAGCACTTGCACAACAAGTTTGATGTCTTGCTCACAAACATGATTCAGGACCATGTGGCTTCTAAGCATAAGAGAACGAATAAACCCGATTTCTTGGACATGGTCATGGCTCATTATGGTGGTGAACACGACGCTCATGGGGACAAACTCTCACTCATCAACGTCAAGGCACTGCTACTCAACCTATTCACAGCAGGAACTGACACGTCTTCAAGCATCATAGAGTGGTCCTTAGCAGAGATGTTGAAGAACCCGAGCATCATGAAGAAGGCTCACGAGGAAATGGACAAAGTGATAGGTAGGGAGCGCCGCCTCAAAGAATCCGACATCGCAAACCTTCCCTACTTCCAAGCCATATGCAAAGAGACTTACAGAAAGCACCCTTCAACTCCTCTCAACCTCCCTCGAATCTCCAACCAACCATGCCAAGTTAACGGCTTCTACATCCCCGAGAACACTCGCTTGAGCGTCAACATCTGGGCCATAGGGAGAGACCCCCAAGTGTGGGACAAACCCCTCGAGTTTAAGCCAGAGAGGTTCTTGAGTGGCAGGAACAAAATGATCGACCCACGTGGCAATGACTTCGAGTTAATACCCTTCGGCGCCGGGCGAAGGATCTGCGCCGGCACCAGAATGGGGATTGTCTTAGTGCACTACATTTTGGGAACCTTAGTTCATTCCTTTGATTGGAAGGTGCCACTTGAAGTGGGGGAATTGAACATGGATGAGGCCTTTGGTCTTGCCTTGCAGAAAAAGGTTCCTCTTGCTGCTTTGGTTACTCCTAGGTTGACTCCTAATGCTTACATTCCTTAG 1605 0.4866 MSPELSNSPHLVHSQFVRFMFVIMDTLFLVKEISASILIFLVTLLSIRTLFKRRGRKLPPGPRGWPVVGALPLMGSMPHVTLANMAKKYGSVMYLKMGSNNMVVASTPAAARAFLKTLDQNFSNRPPNAGATHLAYDAQDMVFAEYGSRWKLLRKLSNLHMLGGKALDEWGKVREEEMGQMLGSMYECSKKGEAVVVPEMLTYSMANMIGQVILSRRVFETKGSDSNQFKDMVVELMTVAGYFNIGDFIPFLAKLDLQGIQRGMKHLHNKFDVLLTNMIQDHVASKHKRTNKPDFLDMVMAHYGGEHDAHGDKLSLINVKALLLNLFTAGTDTSSSIIEWSLAEMLKNPSIMKKAHEEMDKVIGRERRLKESDIANLPYFQAICKETYRKHPSTPLNLPRISNQPCQVNGFYIPENTRLSVNIWAIGRDPQVWDKPLEFKPERFLSGRNKMIDPRGNDFELIPFGAGRRICAGTRMGIVLVHYILGTLVHSFDWKVPLEVGELNMDEAFGLALQKKVPLAALVTPRLTPNAYIP* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0670 534 Gene3D Cytochrome P450 47 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Vra10g0670 534 SUPERFAMILY Cytochrome P450 59 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PANTHER CYTOCHROME P450 71B11-RELATED 29 525 - -
Vra10g0670 534 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0670 534 PANTHER FLAVONOID 3'-MONOOXYGENASE 29 525 - -
Vra10g0670 534 Pfam Cytochrome P450 59 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0670 Vra-Chr10 12647031 12651247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0670 24 532 Cytochrome P450 AT5G07990 45.841 4.82e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0670 K13083 - gmx:547705 874.774