Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0667 ATGAATTTCAACCAAACCATCTTCTCTTCGGCCACGCTGCTGGTCAGCATCCCTCTCTCACGACGTGAGATCTACAACGTGTGCATGGATCAGCCCATGAAGATTATCTCCGATGGCATTTGGAACCACCCCAATGGTTCATCTCCCACACAATCTGCATACACCATGCTTCAGATTCAAATGGTTATAATCTTTGCCATCACTCAAGCCTTTCATTTCATTCTCAAGCAATTTGGGTTCCCTTATTTCGTTTCACAAGTCATGGCTGGTTTTCTGCTAGGGCCAACAATTCCGACAGGACCATTCGAAAAGTACAAGAAGATGTTGTTCCCTTTTGGGAGTGCTGATATCCTGAACACGGTGTCATCGTTAGGGTTCTCATTCTTCCTCTTCATAACCTCAGTGCAAATGGACCTGAGCTTGATCACGAAAACGGGGAAGAAGGCATGGGTCATGGCACTTTCCTCCTACTTCGTCTCCATAGCTATTGGGTTTTCCGTCATGAACTTGTTGTCTTCCCAGCTGGAACAAATAAATGATGATTATGACAGTTTCTCGAGCTTGCCAATGGTCATAGTAACTCAGGGCGGCGTTTCCTTCGCCGTCGTCTCGACCTTGCTCAACGACCTCGGAATTCTCAACTCCGAACTCGGTCGCCTTGCCCTCTCCACAGCTTTCGTCAATGACTTAACTGGTGGAATCGCAGCAGGGTTCGGCGCAGACTATGTGAAAAGCGTGCAATTGGGATTTCCTATTCTAGTCACAAACGTGGTGGCTTTTTTTGTTTACCTAATCTGCATTCCACTGATTGGGCGACCGGCGATGAAGTGGATTGTGAAGAACACCCCAGAAGGGAAACCCGTAAGCAAGATATATATCTATTCCATCATAGTGTCGTTTCTGGGATTAGGGTTCTTTGCAGGGTATTTCAACCAACCTTTCTTAGTAGGGGCTATTATTTTAGGCCTTGCAGTCCCTGAGGGTCCACCATTGGGATCAGAATTGGTTTCCCAACTTGAGTTGTTTTGCAGTTGGTTCCTCACCTCAATTTTTGTCACATGTTGCACCATGAAGGTGGATCTCAAAGCCTGTGTACCTTTATCCTTCTTTGTGGTCGTGTTCCTCTTCATTCTATTAGCCCAATTGATTAAGATACTATTGTGCATGGGAATTTGCCGCTACTGTAAAATGCCCTACTCTGATGGTTTCTGCCTTGCTCTCATTTTGAGCAGCAAAGGTGTTGTGGATGTCTGCTCCTATGTCCTCATGTTCGATTCAATGGCACAAAACAAACAAGTAATAGGGGTTTTGATCGTGTCGGTGTTGGTTCTGGGAACAACTTCGAAGATTGGTGTGAAAGCACTGTATGACCCTTCAAGGAAATACGCAGGGTATCAAAAAAGGAACATCATGAGCTTGAAGCAAAATCATGAGCTTAGGATTGTTGCATGCATCCAAAAGGCATACCAAGTGATTCACATGAAAAACGTGCTCCAGCTGTGTTCTCCTTGTCCAGAGAACACACTGGTGGCAGATATTCTGCATCTGATGGAACTGGTTGGAAGGTCCACTCCCATTTTCATTGCACACAGACTTCAGCAAAAGGTGGGGTCCTCCTACAACTACTCCGGGGAACTCATCGTGACCTTTGACCTTTTTGAACGTGACTATGCGGGTAGTGCCACCGCCAACACCTACACTGCCATATCCCCAATGGCACTGATGCATGAAGATGTGTGTCACCTTGCACTGGACAAAAACGCAGCCATTATAATCCTTCCATTTCATCTGAAATGGGGAGGGGATGGTTCGATTGAGTTAGAGGACAGCAACATAAGGTCATTTAACTCAAGGGTTTTGGAAAGGGCACCTTGCTCCATTGGGATTCTTGTGAGCCGTGGCCCTGCTGGGTTCAGCGCAGCAAATTACAAAGTGGCCATGGTTTTCTTGGGAGGAGCAGATGACAGAGAGGCCTTGTGCTTGGCTAAGAGGTTCACCAAAAACCTTGGCAACAGGTTGTTTGTGTATAGGTTGGTTGCATACGATCGTGATATGTCGAATTGGGAAGACATGATTGATGATGAGGAGTTGAGGGAGGTGCGTGGAGCCTATGGAAAACTTGAAAATGTTGCATACGAAGAGCACACCATAGAAGATGCATCTCAGACAACGGTTTTCATCAAAGACATAGCCAACAAATTTGATTTTATCGTGGTTGGAAGACGCTACGGAATGAGATCTTCTCAAACCTATGGCTTGGAAAATTGGACTGAATATTCGGAGTTGGGAGTCATCGGTGATTTGCTTGCTTCACCTGATATGGAGACTAGGGCTTCTATTTTGGTTGTACAACAACAGTCAACGGCTGCCTCATGA 2376 0.4583 MNFNQTIFSSATLLVSIPLSRREIYNVCMDQPMKIISDGIWNHPNGSSPTQSAYTMLQIQMVIIFAITQAFHFILKQFGFPYFVSQVMAGFLLGPTIPTGPFEKYKKMLFPFGSADILNTVSSLGFSFFLFITSVQMDLSLITKTGKKAWVMALSSYFVSIAIGFSVMNLLSSQLEQINDDYDSFSSLPMVIVTQGGVSFAVVSTLLNDLGILNSELGRLALSTAFVNDLTGGIAAGFGADYVKSVQLGFPILVTNVVAFFVYLICIPLIGRPAMKWIVKNTPEGKPVSKIYIYSIIVSFLGLGFFAGYFNQPFLVGAIILGLAVPEGPPLGSELVSQLELFCSWFLTSIFVTCCTMKVDLKACVPLSFFVVVFLFILLAQLIKILLCMGICRYCKMPYSDGFCLALILSSKGVVDVCSYVLMFDSMAQNKQVIGVLIVSVLVLGTTSKIGVKALYDPSRKYAGYQKRNIMSLKQNHELRIVACIQKAYQVIHMKNVLQLCSPCPENTLVADILHLMELVGRSTPIFIAHRLQQKVGSSYNYSGELIVTFDLFERDYAGSATANTYTAISPMALMHEDVCHLALDKNAAIIILPFHLKWGGDGSIELEDSNIRSFNSRVLERAPCSIGILVSRGPAGFSAANYKVAMVFLGGADDREALCLAKRFTKNLGNRLFVYRLVAYDRDMSNWEDMIDDEELREVRGAYGKLENVAYEEHTIEDASQTTVFIKDIANKFDFIVVGRRYGMRSSQTYGLENWTEYSELGVIGDLLASPDMETRASILVVQQQSTAAS* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0667 791 PANTHER CATION/H+ EXCHANGER 2 14 788 - -
Vra10g0667 791 Pfam Sodium/hydrogen exchanger family 64 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra10g0667 791 Gene3D - 55 463 IPR038770 -
Vra10g0667 791 PANTHER CATION/H + ANTIPORTER 14 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0667 Vra-Chr10 12484915 12488094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0667 22 786 Antiporter Super Family AT5G22900 34.191 9.24e-150 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0667 - - gmx:100797272 1201.81