Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0661 ATGATAAGAGATCTTCAAGTGGTACGAATTGGAGAACAAATTTTGGTGAAGAAGGAAGGTAGTGTAAGCTTCAGACTTAGCCGAACCACCAGTTTGGGGTCATCCAGGCCTTGTCCTGTTTCTTCTGCAAGTCTCTCAATAATTGACAATGAAGATGAGTGTAATCTCCACCCTAGATCTCCTGGAAGTTCGATTAACAGAAGAGAAGCACTACAAGGCAATGACCTGCTTCATGCATCTGTTTTCAATCAAATTCATGTACAATCTTATGAAGATGCTTCCAGTAATTTAAGGTCAAGTGTCCTTACATCAGGTACACTTGGAAACTTGCAGAGAAATCCCACAGATGGAGTTCCCACAAGAGAAGGGCTGGATGTGAACTTATTTTCTCCAAGAATTCAAACAGAGACAGAAATTGATGACACTAGAAATATTGATCAACGAAATGGTGCTCGAGAATCAGTTGAACAGAATGTTCATTTTAGCCGAACTTTAAGTGTTGGAAGACTTCATGACAGAGTTCTTCGTAGAACAACATTTTCAGACCTCACCTTTTTCCCTTTGCAACAGGAAAGAGAGCCGAGAGATGATAGCCACCATAGCCAGGATATTGACAGGCAACCGGTGGAGGGAGATTCAAGAGTGTCGTCATCTGATCACATGACAGTTAATTCTTCTACATCTAGCAAGTCTAACTCCATGTTTGGTATCCAAGACTATGAGGATGAGGCTTCACGATTGAGAGAAGGTAGGCATCAGGATCTTCTGGAGCATAAGTCCAATTTCCTTGAACGGAGAAGAAGAATGCGGTCCCAGTTTGTGCAACTTGTTATCACTTTTACAGCATCTGCAAGTATTACATACTATAGAGATGCTATATATGCCTCGTGGAGTATGAGGATGGAGACAACATGA 915 0.4153 MIRDLQVVRIGEQILVKKEGSVSFRLSRTTSLGSSRPCPVSSASLSIIDNEDECNLHPRSPGSSINRREALQGNDLLHASVFNQIHVQSYEDASSNLRSSVLTSGTLGNLQRNPTDGVPTREGLDVNLFSPRIQTETEIDDTRNIDQRNGARESVEQNVHFSRTLSVGRLHDRVLRRTTFSDLTFFPLQQEREPRDDSHHSQDIDRQPVEGDSRVSSSDHMTVNSSTSSKSNSMFGIQDYEDEASRLREGRHQDLLEHKSNFLERRRRMRSQFVQLVITFTASASITYYRDAIYASWSMRMETT* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0661 304 MobiDBLite consensus disorder prediction 188 235 - -
Vra10g0661 304 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 19 275 - -
Vra10g0661 304 MobiDBLite consensus disorder prediction 214 235 - -
Vra10g0661 304 MobiDBLite consensus disorder prediction 189 213 - -
Vra10g0661 304 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 19 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0661 Vra-Chr10 12431646 12436238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0661 121 276 C3H Transcription Factor Family AT5G45290 45.860 7.24e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0661 - - vra:106774841 576.63