Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0632 ATGGCATCATCTTCTTCTTCTCCAAAGTTTACAGTTCAAAGGTGCCAACCCCAGTTGGTAGTTCCTGCTATCCCCACTCCTCACGAAGTTAAGCCACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTCCACGTTCCCTTCATACAAATTTATCGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTCAAGTCATTCGCCAAGCACTCTCCCAGACACTTGTCTTCTATTACCCATTTGCAGGTAGGCTTAGGGAGGGGCCTCGCCGCAAATTGATGGTGGATTGCACCGGAGAAGGTGCCATGTTCGCTGAGGCTGATGCTGACGTCACACTCGACCAGTTCGGCGATTCTCTCCAGCCTCCATTCCCATGCTTCCATGAACTTCTATTCCATGTCCCTGGCACACAAGAAATTACCAACACTCCCCTTCTACTCGTACAGGTGACACGCCTTAGATGCGGTGGTTTCATCTTGGCCTTCTGCTTCAACCACATCATGTGTGACGGAGCTGGTCTTTCGCAATTCATGAGCACGTGGACTGAAATGGCTCGTGGTGCAACCAAACCTTCCATTCCACCGGTTTGGCGAAGGGAGCTTCTCATGGCAAGACATCCACCACGCATCACATGCAACCATCGCGAATACGAACATGTCCCAGACACAGTCAAAGGAGCCGTCACATCAAACCAACATGACATGGTCCTTCGATCGTTCTTCTTTGGACCTTCCGAAATAGCTGCTATTCGTGGCTTGGTTCCACCCCACCTTAAGCACTGCACAACGTTTGATCTGATCGCGGCATGCTTCTGGCGGTGTCGTACAAAAGCATTGCAGATAAAGGCAGACGAGGATGTTCGCATGATGGTGATAGTGAATGCACGTGGAAGGTTGAATCCTCCTTTACCAGTTGGGTACTACGGCAATGCTATTGCATACCCAGCAGCAGTTACGAGTGCAGGGAAGCTTTGTGGAAATCCGGTTGGGTACGCAGTGGAGTTAATAAAGAAATTGAAAGCTGAGGTGACAGAAGAGTACATGCATTCGGTGGCAGATTTGATGGTGATTAAGGATCGGTGCACGATTACAAGTGTAAGGTCTTGTATCATTTCAGATTTGACACGTTTGAAGCTTAGAGAAGCGGATTTTGGGTGGGGTGAGGCTGTGTATGGTGGAGTGGCTGAAGGTGGAACTGGGAGGTTTCTTGAAGCAACCTTTCAGGTTTTGCATAGAAATGCAAAAGGAGAAGAAGGCATCGTCTTACCAATTTGGTTGCCTGCTGAAGCTATGGATAGGTTTGCGAAAGAGTTGGATCATATGTTTCGCAACCGAAACCAAACTAATACTCTGACTCCTAGGTCAATCATGTCTGCTTTATGA 1383 0.4823 MASSSSSPKFTVQRCQPQLVVPAIPTPHEVKPLSDIDDQEALRFHVPFIQIYRKQASMAEKDPVQVIRQALSQTLVFYYPFAGRLREGPRRKLMVDCTGEGAMFAEADADVTLDQFGDSLQPPFPCFHELLFHVPGTQEITNTPLLLVQVTRLRCGGFILAFCFNHIMCDGAGLSQFMSTWTEMARGATKPSIPPVWRRELLMARHPPRITCNHREYEHVPDTVKGAVTSNQHDMVLRSFFFGPSEIAAIRGLVPPHLKHCTTFDLIAACFWRCRTKALQIKADEDVRMMVIVNARGRLNPPLPVGYYGNAIAYPAAVTSAGKLCGNPVGYAVELIKKLKAEVTEEYMHSVADLMVIKDRCTITSVRSCIISDLTRLKLREADFGWGEAVYGGVAEGGTGRFLEATFQVLHRNAKGEEGIVLPIWLPAEAMDRFAKELDHMFRNRNQTNTLTPRSIMSAL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0632 460 Pfam Transferase family 12 440 - -
Vra10g0632 460 Gene3D - 6 219 IPR023213 -
Vra10g0632 460 PANTHER ALCOHOL ACYLTRANSFERASE 10 444 - -
Vra10g0632 460 Gene3D - 232 443 IPR023213 -
Vra10g0632 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0632 Vra-Chr10 12204177 12205784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0632 43 393 Monolignol Biosynthesis Gene Families AT5G48930 30.854 1.17e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0632 K19861 - gmx:100792864 670.233