Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0631 ATGGCCGCATCATCATCTTCTTCTTCTTCTCTGAAGTTTACAGTGCGAAGGTGCCAACCCCAGCTGGTGCCTCCTGCTATTCCCACTCCTCAAGAAGTTAAGCCACTTTCCGACATTGATGATCAAGATGGTTTGCGTTTCCACATTCCCTTCATACAAATTTATGGAAAGAGAGCATCAATGGCAGAGAAAGACCCAGTTCAAGTCATTCGCCAAGCACTGTCACAGACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTACAGAGGGGCCTCACCGCAAATTGATGGTGGATTGCACTGGAGAAGGTGCCATGTTCATTGAGGCTGATGCAGACGTCACGCTTGATCAGTTCGGCGATTCTCTCCAGCCTCCATTCCCATGCTTCCATGAACTTCTATATGTTCCTGCCCCACAACAAATTACTGACACTCCCCTTCTAATCGTACAGGTGACACGTCTTAGATGCGGTGGTTTCATCTTGGCTTTCTGCTTCAACCACACCATGTGTGACGGAGCTGGTCTTTCACAATTCATGAGGACGTGGACTGAAATGGCTCGTTGTGCAACCAAACCTTCCATTCCACCTGTGTGGTGTAGGGAACTCCTGATGGCAAGACATCCACCTCGTATTACATGCAACCATCGCGAATACGAACATGTCCCAGACACAGTCAATGGAGCCGTCACATCAAACCAACATGACATGGTGCTTCGATCGTTCTTCTTTGGACCTTCCCAAATAGCTACTATACGTGGCTTGGTTCCACCCCACCTTCAGCACTGCACAACGTTTGATCTCATCACGGCATGCTTCTGGCGCTGTCGTACAAAAGCATTGCAGATAGAGGCAGACGAGGATGTTCGCATGATGGTGATAGTGAATGCACGTGCAAGGTTGAATCCTCCTTTACCAGTTGGGTACTACGGCAATGCTATTGCATACCCTGCAACAGTTACCACTGCAGGGAAGCTTTGTGAAAATCCATTTGGGTATGCTGTGAATTTGATAAATAAAGTGAAGGGTGAGGTGACAGAAGAATACGTACATTCTGTTGCGGATCTATTGGTGTCTAAGGGACGGTGCTCTTTCACAGCGGTGAGATCTTTCATTGTGTCCGATTTGAGACGTTTTAGTTTCAGAGAAATTGATTTTGGTTGGGGTAAAGCATTGTATGGTGGAATAGCCAAAGCTGGAGCTGGAGCATTTCCTGCAGTAATATATCTGACATCGCATGAGAATGCAAATGGAGAAGAAGGTGTAGTTATACCAATTTGGTTGCCTGCCGAAGCCATGGAAAGGTTTGAACACGAGTTATGTGACATGCTTCGAAACTAA 1341 0.4676 MAASSSSSSSLKFTVRRCQPQLVPPAIPTPQEVKPLSDIDDQDGLRFHIPFIQIYGKRASMAEKDPVQVIRQALSQTLVFYYPFAGRLTEGPHRKLMVDCTGEGAMFIEADADVTLDQFGDSLQPPFPCFHELLYVPAPQQITDTPLLIVQVTRLRCGGFILAFCFNHTMCDGAGLSQFMRTWTEMARCATKPSIPPVWCRELLMARHPPRITCNHREYEHVPDTVNGAVTSNQHDMVLRSFFFGPSQIATIRGLVPPHLQHCTTFDLITACFWRCRTKALQIEADEDVRMMVIVNARARLNPPLPVGYYGNAIAYPATVTTAGKLCENPFGYAVNLINKVKGEVTEEYVHSVADLLVSKGRCSFTAVRSFIVSDLRRFSFREIDFGWGKALYGGIAKAGAGAFPAVIYLTSHENANGEEGVVIPIWLPAEAMERFEHELCDMLRN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0631 446 Pfam Transferase family 18 440 - -
Vra10g0631 446 Gene3D - 221 440 IPR023213 -
Vra10g0631 446 PANTHER ALCOHOL ACYLTRANSFERASE 13 441 - -
Vra10g0631 446 Gene3D - 9 220 IPR023213 -
Vra10g0631 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0631 Vra-Chr10 12194437 12196115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0631 46 443 Monolignol Biosynthesis Gene Families AT5G48930 28.261 3.96e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0631 K19861 - gmx:100787907 669.463