Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0630 ATGGCTTCATCATCTTCCTGTCCACCGTTTACTATGCATAAATGCAAACCTGAGCTAGTGACTCCTTCAATACACACTCCCGATGAAACTAAACTACTGTCTGAAATAGATGATCAAAACTACCTTCGTTTTCATTATTCAATAATACAAATCTATCAGAATGAATCATCAATGGCCAATAAAGACCCAGTAAGAGTGATTCGGCAGGCACTGGCACAAGCACTTGTTTTCTATTACCCATTTGCAGGTAGGCTTAGGGAGGGTCGTGGCCACAAATTAATGGTGGATTGCACAGGAGAGGGTGTCATGTTCATTGAGGCTGACGCTGACGTAACACTAGATCAGTTTGGTGATGATCTTCAACCTTCATTCATATACTCTAAGGCATTTATGTGTGATGTTGCAGAATCCGAAGATATTAAAAATTTGCCTCTTCTACTCATCCAGGTGACAAGACTCAAGTGTGGTGGTTTCGTGGTGTCGACAGGGTGGAACCACGTGATGGCAGACGGAGCTGGTTTGTCACAGTTCATGCAAGCATGGGCTGAAATGGCTCGAGGTATAAAGACTCCTTCCATTTCACCTCTCTGGAGAAGGGAGCTTCTGATGGCAAGAGATCCACCTCGCATTACATGCAACCATCGTGAATACGACCAAATCCAAGACGACAACCTCAATTCTCCCGACCTCGACCTGGTTCATCGATCATTCTTCTTCGGACCTGCTCAGATGGCTGCCCTTCGTGTTTTGCTTCCCCGTCAGCTTCGACAGTGCACCGCATTCGATCTCATCACGGCATGCTTCTGGCGTTGTCGCACAAGAGCGCTGCAAATAGACGCAGACGAGGATGTCCGCATGATGTGCATCGTGAACGCGCGTAACAGGTTCCGTCCTCCGTTACCTGTTGGTTACTACGGCAACGCTTTTGCATACCCTGCCGCAATGACCACCGCGGGGAAGCTCTGCGCAAATCCGTACGAGTATGCGGTGGAGTTGATTCACAAGGTGAAGGGTGAGGTGACAGAGGAGTATATGCATTCGGTGGCGGATCTAATGGTGCTTAAGGGACGGTGCATGCCCACAACGGTAAGGTCTTGTTTGGTGTCAGACCTGACTCGTGCTAGGTTCAGGGACGTTGATTTTGGATGGGGCAAGGCTTTGTCTGGTGCACCAGCCAAAGGTAGCACTGGACCCTTTTACGGAGGAACACACATTGTGTCGTATAAGAATTCGAAAGGAGTAGATGGGTTGGTGTTACCAGTTTGGATGCCCGCAGAAGCCATGCCCATGTTTGTGAAAGACATGGAAGATATGATGAGTGGCAACCAAAACCAGCAGAGCCACCCTACAAAAGCTGCTTCTTTTATCAGGTCTACCATGTAG 1383 0.4823 MASSSSCPPFTMHKCKPELVTPSIHTPDETKLLSEIDDQNYLRFHYSIIQIYQNESSMANKDPVRVIRQALAQALVFYYPFAGRLREGRGHKLMVDCTGEGVMFIEADADVTLDQFGDDLQPSFIYSKAFMCDVAESEDIKNLPLLLIQVTRLKCGGFVVSTGWNHVMADGAGLSQFMQAWAEMARGIKTPSISPLWRRELLMARDPPRITCNHREYDQIQDDNLNSPDLDLVHRSFFFGPAQMAALRVLLPRQLRQCTAFDLITACFWRCRTRALQIDADEDVRMMCIVNARNRFRPPLPVGYYGNAFAYPAAMTTAGKLCANPYEYAVELIHKVKGEVTEEYMHSVADLMVLKGRCMPTTVRSCLVSDLTRARFRDVDFGWGKALSGAPAKGSTGPFYGGTHIVSYKNSKGVDGLVLPVWMPAEAMPMFVKDMEDMMSGNQNQQSHPTKAASFIRSTM* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0630 460 Gene3D - 9 214 IPR023213 -
Vra10g0630 460 PANTHER ALCOHOL ACYLTRANSFERASE 10 441 - -
Vra10g0630 460 MobiDBLite consensus disorder prediction 440 460 - -
Vra10g0630 460 Pfam Transferase family 15 438 - -
Vra10g0630 460 Gene3D - 215 434 IPR023213 -
Vra10g0630 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0630 Vra-Chr10 12191777 12193263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0630 19 433 Monolignol Biosynthesis Gene Families AT5G48930 29.070 1.49e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0630 K19861 - gmx:100792864 604.364