Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0628 ATGGCCTCATCATCATCATCTTCTTCTTCTCTCAAGTTTACAGTGAGAAGATGCCAACCGCAGCTGGTGCCTCCTGCTATCCCTACTCCTCATGAAGTTAAGCCACTTTCCGACATTGATGATCAAGATGGTTTGCGTGTCCACCTTCCCATGATACACATTTATAAAAAGCAAGCATCAATGGCAGAAAAAGACCCAGTTCAAGTCATTCGCCAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGAGAGGGGCCTAACCGCAAATTGATGGTGGATTGCACCGGAGAAGGTGTCATGTTCATCGAGGCCGATGCAGACGTCACATTTGATCAGCTTGGCGATTCTCTCCAGCCTCCATTCCCATGCTTCCATGAACTTCTATACTATGTCCCTGCCACACAACAAATTACCAACACTCCCCTTCTACTTGTACAGGTGACACGGCTCAAGTGTGGTGGTTTCATCTTAGCCATCGGCCTCAACCACACCATGTGCGATGGACCCGGTTACCAACAATTCATGAGCGCGTGGGCGGAAATGGCTAGAGGTGCAACCAAACCTTCCATTGCACCAGTGTGGCGTAGGGAGCTCCTAATGGCAAGAGACCCACCTCGCATTAAATGCAACCATCGTGAATTCGAGCAAGTCCGAGACACCCTTCCTTCTTCCAACCAAAACATGGTTCAACGATCATTCTTCTTTGGACCACTCGATATAGCTGCACTTCGACGCTTGATTCCCCAACACCAGCACTGCACCACATTTGATCTCATCACAGCATGCCTCTGGCGCTGTCGCACAAAAGCACTGCAGATAGAGGCAGACGAGGATGTTCGCATGATGTGCATAGTCAACGGACGTGGTCGATTCAACCCTCCACTTCCTGTTGGTTACTACGGCAACGCTTTTGCATATCCGGCGGCAGTAACGACTGCAGGGAAGCTATGCAGAAACCCATTTGGGTATGCGGTGGAATTGATAAATAAAGTGAAAGGTGAGATGACAGAAGAGTACCTGCAATCTGTTGCAGACCTGATGGTGATGAAGGGACGATGCTTATTCACAACTGTGAGGTCTTATATTGTGTCACATTTGGCACGTTTTAACCTTAGACAAGTGGATTTTGGTTGGGGCGAGGCTGTGTACGGTGGAGTGGCCCAAGCTGGGGTTGGGAGGTTCTTAGGAGTTTCGTATTTCTGTTCTGCTAAAAATGGAAACGGAGAAGAAGGCATAATATTTCCGATTTGCTTACCTGCTGAAGCTATGGAGAGGTTTGCTCAAGAGTTTAACCACATGCTATGCAACAAAAGTCAACCTCAAACCAGTTCTGCTACTTTTATAATGTCTACCCTCTAA 1377 0.4771 MASSSSSSSSLKFTVRRCQPQLVPPAIPTPHEVKPLSDIDDQDGLRVHLPMIHIYKKQASMAEKDPVQVIRQALSQTLVFYYPFAGRLREGPNRKLMVDCTGEGVMFIEADADVTFDQLGDSLQPPFPCFHELLYYVPATQQITNTPLLLVQVTRLKCGGFILAIGLNHTMCDGPGYQQFMSAWAEMARGATKPSIAPVWRRELLMARDPPRIKCNHREFEQVRDTLPSSNQNMVQRSFFFGPLDIAALRRLIPQHQHCTTFDLITACLWRCRTKALQIEADEDVRMMCIVNGRGRFNPPLPVGYYGNAFAYPAAVTTAGKLCRNPFGYAVELINKVKGEMTEEYLQSVADLMVMKGRCLFTTVRSYIVSHLARFNLRQVDFGWGEAVYGGVAQAGVGRFLGVSYFCSAKNGNGEEGIIFPICLPAEAMERFAQEFNHMLCNKSQPQTSSATFIMSTL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0628 458 PANTHER ALCOHOL ACYLTRANSFERASE 13 442 - -
Vra10g0628 458 Pfam Transferase family 18 439 - -
Vra10g0628 458 Gene3D - 9 218 IPR023213 -
Vra10g0628 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 442 - -
Vra10g0628 458 SUPERFAMILY CoA-dependent acyltransferases 246 442 - -
Vra10g0628 458 Gene3D - 219 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0628 Vra-Chr10 12171855 12174356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0628 46 434 Monolignol Biosynthesis Gene Families AT5G48930 29.630 1.98e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0628 K19861 - gmx:100792864 690.649