Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0625 ATGGCCTCATCACCATCTTCTTCTTCTCTAAAGTTTACAGTGCGAAGGTGCCAACCTCAGCTTGTGCCTCCTGCTATTCCCACTCCTCATGAATTTAAGCCACTTTCCGACATTGATGATCAAGAAGCCCTTCGTATCCACGTTCCGATGATACAAATTTATCGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTCAAGTCATTCGCCAAGCACTGTCACAGACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGAGAGGGGTCTCACCGCAAATTGATGGTGGATTGCACTGGAGAAGGTGCCATGTTCATTGAGGCTGATGCAGACGTCACGCTTGATCAGTTCGGCGATTCTCTTTACCCTCCATTCCCATGCTTCCATGAACTTCTATACGAAGAAGTGGATTTTGGTTGGGGTGACGCTGTGTACGGTGGAGTAGCCAAAGCTGGGGTTGGGAGGTTCTTAGGAGTTTCGTATTTCTGTTCTGCTAAGAATGGAAAAGGAGAAGAAGGTATAATATTTCCGATTTGCTTACCTGTTGAAGCTATGGAGAGGTTTGCTGAAGAGTTTAACCTCATGCTAGGCAACAAAAACCAACCTGAAACCAGTTCTGCTACTTTCATAAAGTCTACCCTGTAG 648 0.4568 MASSPSSSSLKFTVRRCQPQLVPPAIPTPHEFKPLSDIDDQEALRIHVPMIQIYRKQASMAEKDPVQVIRQALSQTLVFYYPFAGRLREGSHRKLMVDCTGEGAMFIEADADVTLDQFGDSLYPPFPCFHELLYEEVDFGWGDAVYGGVAKAGVGRFLGVSYFCSAKNGKGEEGIIFPICLPVEAMERFAEEFNLMLGNKNQPETSSATFIKSTL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0625 215 PANTHER ALCOHOL ACYLTRANSFERASE 133 199 - -
Vra10g0625 215 PANTHER ALCOHOL ACYLTRANSFERASE 12 135 - -
Vra10g0625 215 Pfam Transferase family 17 135 - -
Vra10g0625 215 Gene3D - 8 147 IPR023213 -
Vra10g0625 215 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 135 - -
Vra10g0625 215 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 133 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0625 Vra-Chr10 12151073 12152726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0625 10 120 Monolignol Biosynthesis Gene Families AT5G48930 36.036 2.98e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0625 K19861 - vra:106774835 431.024