Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0622 ATGATGGAAATCAAAACAACACAGCATTTGACCAAGATGACACCGGTGGATCTGTCTACTATTAGTCTCCGGCCATTCAAGATCAGTGACGTTGATGATTTTTTCTTGTGGGCAGGGGATGATCAAGTGACTAGAAATCTCCGATGGAAAACGTGTGGCTCCAAAGAAGAGGCTTTGGCCTTCATAAGGGATGTTTGCATACCTCATCCATGGCGTCGCTCAATCTGCCTTGATGACTGTTCCATCGGCTTTATTTCAGTATTTCCTTGGTCAGGTGAAGAAAGGCACAAGGCTGACATAGGCTATGCCATTGGGAGCACCTATTGGGGCCAAGGGATAGCCACCAAAGGGCTCAAGATTGCTGTGCCTCAAGTCTTCAAGGACTTTCCCAATTTGCTGAGGTTGCAGGCTTTTGTTGATGTTGAGAACACAGCTTCTCAGAGGGTGTTGGAAAAAGTTGGATTCATCAGAGAGGGTGTTCTCAGAAAGTATACTTGTATCAAAGGGGTGGTTAAGGATTCTGTTCTGTATAGTTTCTTGTCAACGGAAGAAATTCTTGCCTGTGACTAG 570 0.4526 MMEIKTTQHLTKMTPVDLSTISLRPFKISDVDDFFLWAGDDQVTRNLRWKTCGSKEEALAFIRDVCIPHPWRRSICLDDCSIGFISVFPWSGEERHKADIGYAIGSTYWGQGIATKGLKIAVPQVFKDFPNLLRLQAFVDVENTASQRVLEKVGFIREGVLRKYTCIKGVVKDSVLYSFLSTEEILACD* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0622 189 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 17 185 - -
Vra10g0622 189 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 21 177 IPR000182 GO:0016407
Vra10g0622 189 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 20 180 IPR016181 -
Vra10g0622 189 Pfam Acetyltransferase (GNAT) domain 22 155 IPR000182 GO:0016407
Vra10g0622 189 Gene3D - 5 180 - -
Vra10g0622 189 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 17 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0622 Vra-Chr10 12116649 12117348 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra10g0622 Acetyltransf_3 8.9e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0622 - - vra:106775254 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0622 10 12116649 12117348 Vra10g0622 10 12116649 12117348 ECH