Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0614 ATGTCGCAGAAGAGAGGAAGAGAATCGAAGAGGACGAATTGGAACAATAAAGCCATACTCCATTGTAGCCACTGTAAAGTTCTGTTCAGTCTTCAGGCAAAGCAAAGTCGAAGTAAAATGGGCGCTCAGAAGAAAAGCGGCGCTAGGGTTTCCGAGGACCCCGACGAACTGGTGCGGATTCCGTTGCAGGCCATTCTCTTGGCTGATAGTTTCACCACCAAGTTCAGACCTATAACGCTCGAGCGCCCCAAAGTGCTTCTTCCGCTCGTGAATGTTCCGATGATAAATTACACGCTGACTTGGCTCGAATCCGCCGGCGTCGAAGAGGTTTTCGTATTCTGTTGTTCTCACTCCAAGCAGGTCATTAACTACCTCGAGAAATCCGAGTGGCTATCTCAACCGAATTTTACGGTGACGACTATAGAATCGCAGAACTCTGTCAGCGCCGGAGATGCTCTCCGCGTAATTTACGAGCGCAATGTGATACAAGGAGACTTTGTCCTTATCAGTGGAGATACTGTGAGCAACATGTCACTTACTCAGGCACTTCTGGAACATAAAGAAAGGAGGAAGAAAGATAATAATGCAGTAATGACTATGGTCATTAAACGGTCAAAACCTAATCCAGCCATCCATCAATCTCGACTTGGTACCGATGAACTTTTTATGGCTATTGATCCTAATACCAAGCAGCTTGTGTATTACGAGGATAGGGCAGACCAATCAAGAGGGACACTACAGCTTGACAAGTCATTGCTTGTTGATAATCCTTCGCTCTCTCTGCATCATGATAAGCAGGATTGTTACATTGACATTTGCTCGCCAGAAGTACTTAGTCTATTTACAGACAATTTTGACTACCAACATCTACGGCGTCATTTTGTCAAGGGATTGCTTCTTGATGATATAATGGGGTACAAAATTTTTGTTCATGAAATCCACTCAGACTATGCTGCAAGGATTGATAATTTCCGAAGTTATGATACTGTCAGCAAGGATATAATTCATCGATGGACTTATCCACTGGTGCCTGATGTAATGAATTTTGGCCATACTGTGACTAAACTTGAACGACAAGGAATGTACCGTGCTTTAGAAATATCACAATCGCAGTCTGCTGTTATTGGCCCTTTCACTGTCATTGGATCTGGCACCAAAATTGGGAATAACAGTAAAATTTTGAATTCCGTTATTGGTGAAGGATGTAAAATTGGGTCAAATGTTATCATAGAGGGATGCTATATATGGGATAACATCATCATAGAAGATGGCTGTAAACTCCAGCATGCAATTGTATGTGATGGAGTGATTATAAAGTCAGGGGCTGTTCTGGAACCCGGTGTTATTTTGTCTTTTAAGGTTGTAGTTGGGCCAGAGTTTGTTGTTCCTGCATATTCGAAAGTATCTCTTTTTCAGCAGCCAATTGAGGAGGACAGTGACGAGGAGCTTGAATATGCTGATAGTACTAGTGTCATAGGCAGCCAAGTGGATAAATCAGATGTAGAGATTGCTTCCAAAGTATTGGAGACAAATTTTAGTCCGGCTTCTCAGCTAGGTGTGGGTGGGGCAGGTCATGTTTGGTCAACATGTGAAGGTGGCCTCGAAGAAGAGTGGAGGCACTCAGTGGCCCCTATTCCTAAAGATAAAATTCAGGAGGCTATCAAAACTATGGAAGATGATATGGAGTTTGCTCCGGATGACATTTTTCTCCCACCTTCTGGAGAGCTGAAACCTAATTCTAATGATTCAGATGATGATGATCATGAAGATTCTAGAGATGACTCTTATTACTTTGAGAAAGAGGTTGAAGCAACCTTTCTTAGAGCTGTGCATGAAAACATACAAGAAAGCCATTTGATCTTAGAAATCAATTCTTTGAAGTTGTCATACAATAAAGAGACTTCTGATTGTGCTGGAGCATTATTTTATGCCATGATGAAGTATGCTTTAGACATCCCCCATAGTTCATCTGATGGTTTGCTTCAAAATGTTCAAGGTGTATTTACAAAGTGGAAAAAGGCTCTTACATCCTATCTGAATGGCAACGATGAGCAGATTGAAGTAATACTTAAATTTGAAGAAATGTGTTTGGAGTCGGCTAAGGAGTTTGCTCCATTGTTCACAACGATTTTGCACCACTTGTATAATGACGATTTTGTAGAAGAAAATGCTATCTTGAGTTGGGAAGATGAGAAGAAGGAGGCTGATGAGGCAGATAAAGTTTTTGTTAAGCAAGCCCAAAAGTTCATTCAATGGCTAAAAGAGGCACCGGAAGAAGACGAAGATGACGAGGAATGA 2298 0.4178 MSQKRGRESKRTNWNNKAILHCSHCKVLFSLQAKQSRSKMGAQKKSGARVSEDPDELVRIPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCSHSKQVINYLEKSEWLSQPNFTVTTIESQNSVSAGDALRVIYERNVIQGDFVLISGDTVSNMSLTQALLEHKERRKKDNNAVMTMVIKRSKPNPAIHQSRLGTDELFMAIDPNTKQLVYYEDRADQSRGTLQLDKSLLVDNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGHTVTKLERQGMYRALEISQSQSAVIGPFTVIGSGTKIGNNSKILNSVIGEGCKIGSNVIIEGCYIWDNIIIEDGCKLQHAIVCDGVIIKSGAVLEPGVILSFKVVVGPEFVVPAYSKVSLFQQPIEEDSDEELEYADSTSVIGSQVDKSDVEIASKVLETNFSPASQLGVGGAGHVWSTCEGGLEEEWRHSVAPIPKDKIQEAIKTMEDDMEFAPDDIFLPPSGELKPNSNDSDDDDHEDSRDDSYYFEKEVEATFLRAVHENIQESHLILEINSLKLSYNKETSDCAGALFYAMMKYALDIPHSSSDGLLQNVQGVFTKWKKALTSYLNGNDEQIEVILKFEEMCLESAKEFAPLFTTILHHLYNDDFVEENAILSWEDEKKEADEADKVFVKQAQKFIQWLKEAPEEDEDDEE* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0614 765 CDD LbH_eIF2B_epsilon 380 458 - -
Vra10g0614 765 MobiDBLite consensus disorder prediction 564 593 - -
Vra10g0614 765 Pfam Nucleotidyl transferase 64 204 IPR005835 GO:0009058|GO:0016779
Vra10g0614 765 SUPERFAMILY ARM repeat 598 756 IPR016024 -
Vra10g0614 765 Pfam eIF4-gamma/eIF5/eIF2-epsilon 684 763 IPR003307 GO:0005515
Vra10g0614 765 CDD W2_eIF2B_epsilon 598 756 IPR044123 GO:0005085|GO:0031369
Vra10g0614 765 Gene3D Hexapeptide repeat proteins 351 478 - -
Vra10g0614 765 SUPERFAMILY Nucleotide-diphospho-sugar transferases 60 408 IPR029044 -
Vra10g0614 765 SMART 542_3 672 759 IPR003307 GO:0005515
Vra10g0614 765 ProSiteProfiles W2 domain profile. 592 763 IPR003307 GO:0005515
Vra10g0614 765 SUPERFAMILY Trimeric LpxA-like enzymes 305 468 IPR011004 -
Vra10g0614 765 Gene3D - 585 764 - -
Vra10g0614 765 CDD eIF-2B_epsilon_N 62 278 IPR035543 -
Vra10g0614 765 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 55 342 IPR029044 -
Vra10g0614 765 Pfam Bacterial transferase hexapeptide (six repeats) 379 412 IPR001451 -
Vra10g0614 765 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 49 764 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0614 40 756 Eukaryotic Initiation Factors Gene Family AT2G34970 64.088 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0614 K03240 - gmx:100784894 1302.73