Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0515 ATGGTGGTGAAGGTGTATGGTGATGTAAGGGCAGCATGCCCTCAAAGAGTGATGATGTGCCTCTTGGAGAAAGGAGTAGACTTTGAACTTGTGCCTATTGATCTTCAACAGGGACAACATAAGACACCTCAATTCCTTCTCCTACAGCCCTTTGGTCAAGTTCCAGTTGTGGAAGACGGTGATTTCAGGCTCTTTGAATCAAGAGCTATTATAAGGTACTATGCAACAAAATATGCAGAGCGTGGTAGTGAGCTATTGGGTAAAACCTTAGAGGAAAGGGCTTTGGTGGAGCAGTGGCTTGAAGTAGAAGCACACAACTTCAATAATTTGTGCTTCACCATAATGTTTCAGCGTGTGATCCTACCAAGGATGGGTAACGTAGGGAACTTGACCTTGGCAGACAAAAGTGAGAAAGATTTAGGGAAGGTCCTTGATGTATATGAAAGTAGGCTCTCTGAAAGCGCATACCTTGCAGGAGATTTTTTCTCTTTGGCTGATCTCAGCCACCTTCCAGGGCTTGGACATCTTATTGAGGAAGCCAAACTTGGCCACTTGGTTACTGAGAGGAAGAATGTCTGTGCTTGGTGGCAGAAAATTTCAAGCAGGCCAGCTTGGATGAAGTTAAAGGATCTGGCTCACTAA 642 0.447 MVVKVYGDVRAACPQRVMMCLLEKGVDFELVPIDLQQGQHKTPQFLLLQPFGQVPVVEDGDFRLFESRAIIRYYATKYAERGSELLGKTLEERALVEQWLEVEAHNFNNLCFTIMFQRVILPRMGNVGNLTLADKSEKDLGKVLDVYESRLSESAYLAGDFFSLADLSHLPGLGHLIEEAKLGHLVTERKNVCAWWQKISSRPAWMKLKDLAH* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0515 213 Pfam Glutathione S-transferase, C-terminal domain 129 203 IPR004046 -
Vra10g0515 213 Gene3D - 87 208 - -
Vra10g0515 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vra10g0515 213 SFLD Main (cytGST) 4 202 - -
Vra10g0515 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 209 - -
Vra10g0515 213 SUPERFAMILY GST C-terminal domain-like 82 207 IPR036282 -
Vra10g0515 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Vra10g0515 213 Gene3D Glutaredoxin 2 86 - -
Vra10g0515 213 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Vra10g0515 213 CDD GST_C_Phi 91 209 IPR034347 -
Vra10g0515 213 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Vra10g0515 213 Pfam Glutathione S-transferase, N-terminal domain 1 73 IPR004045 -
Vra10g0515 213 CDD GST_N_Phi 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0515 Vra-Chr10 11049353 11051023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0515 1 212 Glutathione S-transferase Gene Family AT3G03190 53.302 1.11e-82 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0515 K00799 - gmx:100796010 358.221