Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0478 ATGTCAAACCGAGTTTGCATAAAAAGAGGGTTGTTGACACTAATGGGTGTTAAGTTTATGGGCAGACTGGAACACCCAACTCGTTTTTCCATGTATGTTCGATCCAAAACAACGTCTGCTCAGTATGTAGCATCGAGATTTCGAGACCCCACGTTTGAGAAACTCATGGAAAACTACAAGAACCTTGTTAAGGTCATTTCCATTCAAGACCTCATCCTTGCAAACCCAAAGAACCCATCAGTCTCCATTGATTTCCTCTCCAACCTCTCCCAGAAGCTCCACTTAAACCGCGGGGCCACTGCCTTCCTCTGCAAGTTTCCTCACATCTTCCACATTTACTATGATCATTCCAAGTTGAAGCCCTTTTGCAGGTTAACTGACGCTGCTCTTGGTGTTACACGGCAGGAAGCGGTGGCTATCAATGCTTCTTTGCCTGTTGTTGTTGAAAGACTTGTCCGGATACTCTCCATGTCAGCATCCAGAATGGTGCCTCTTAGAGCTGTTTTTAAGGTTTGGAAGGAGCTTGGGCTGCCTGATGATTTCGAGGACTCTGTTATATCTGCTAATTCTGGTGTTTTTCAGCTGTGTGATGGGCATGAACAGAATACTCATTTGTTGAAGCTGGTTGATGGTGTTTCCAGCAATGGCATTAGGGCGGCTGTTGAGGATTGGAGGGTTGTTGAGTGCTGCAAGGAAGACTGCAGTGTTGATAGGATGGAAATGCAGTTTAGTTTCAAACACGGATATCCTCCGGGGATGAGGTTGAGCAAGAATTTCAAGGCCAAGGTGAAGGAGTGGCAGAGGTTGCCATATGTGGGGCCTTATGAAGTGCCGGGTGAGAAGAAGAAGTCTAAGGCTGGAATGATGGCCATGGAGAAGCGAGCAGTATCGATTGTTCACGAGTTCCTGAGTTTGACAGTAGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTAGGAAATGGTTTGGGATTGATTTAAATGTAAGGGATCTCTTCTTGGACCACCCAGGGATCTTCTATTTGTCAACTAAGGGTAAAAAACATACTGTTTTCCTGAGGGAAGCTTATGAACGAGGGTGTTTGATAGAACCAAATCCTGTCTATGATGCAAGAAGACGGCTACTTGATCTTGTTGTTTTAGGACGTCGGGGTCTGCCAGCTGTTAATTCGAAGTTGGAGGATTCAAGCAGCTGCGGTGAGGCTAGACAAGAGGAAAATCAGCAAAGACATTGTTTGTCACCATCTTGA 1251 0.4548 MSNRVCIKRGLLTLMGVKFMGRLEHPTRFSMYVRSKTTSAQYVASRFRDPTFEKLMENYKNLVKVISIQDLILANPKNPSVSIDFLSNLSQKLHLNRGATAFLCKFPHIFHIYYDHSKLKPFCRLTDAALGVTRQEAVAINASLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGVFQLCDGHEQNTHLLKLVDGVSSNGIRAAVEDWRVVECCKEDCSVDRMEMQFSFKHGYPPGMRLSKNFKAKVKEWQRLPYVGPYEVPGEKKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNVRDLFLDHPGIFYLSTKGKKHTVFLREAYERGCLIEPNPVYDARRRLLDLVVLGRRGLPAVNSKLEDSSSCGEARQEENQQRHCLSPS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0478 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 24 409 IPR045040 GO:0003723
Vra10g0478 416 Pfam Plant organelle RNA recognition domain 48 383 IPR021099 GO:0003723
Vra10g0478 416 PANTHER OS04G0618900 PROTEIN 24 409 - -
Vra10g0478 416 MobiDBLite consensus disorder prediction 397 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0478 Vra-Chr10 10674369 10677829 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0478 - - gmx:100808404 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0478 10 10674369 10677829 Vra8g1474 8 31686159 31689101 PCT