Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0463 ATGGCGAAAGAAGATCAAGGACTTGCCATAGGAATCGACCTTGGCACAACCTACTCCTGTGTTGCAGTGTGGCGTGAACATCATTCTCGAGTGGATATCATTCATAATGACCAAGGCCACAACACCACTCCTTCTTTTGTTGCTTTCACAGATCATGAAAGGTTGATTGATGCCAAGAGATTGATAGGTAGGAAATACAGTGATCCTGATGTTCAGAAAGATATGATGTCATGGCCATTCAAGGTTGTCGCTGGTGCTAATGACAAACCTATGATCACCCTTAACTATAAAGGTAAGGAGAAACAATTTTGTGCTGAGGAAATTTCATCCATGGTCCTGGTGAAGATGAAAGAGATTGCAGAGGACTATTTGGAAACCAGGGTGAAGAATGCGGTGGTTACTGTGCCTGCTTATTTCAATGACTCTCAGCAGAATTTCAGTTCAAAAGTTTGCTCAGAAGACAGGAAAAAGATCAGTTCTGCAATAACTAAGGCCACAGAGTTACTTGATGGTGATCAGCAGGAGGAGGAAATAGATGTGTTTGAGGATCATCTGAAAGAACTTATTAACCTCTTTGAACGCTTTGTTAAAGAGTCTGATTAG 603 0.4146 MAKEDQGLAIGIDLGTTYSCVAVWREHHSRVDIIHNDQGHNTTPSFVAFTDHERLIDAKRLIGRKYSDPDVQKDMMSWPFKVVAGANDKPMITLNYKGKEKQFCAEEISSMVLVKMKEIAEDYLETRVKNAVVTVPAYFNDSQQNFSSKVCSEDRKKISSAITKATELLDGDQQEEEIDVFEDHLKELINLFERFVKESD* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0463 200 Pfam Hsp70 protein 9 144 IPR013126 GO:0005524|GO:0140662
Vra10g0463 200 SUPERFAMILY Actin-like ATPase domain 8 151 IPR043129 -
Vra10g0463 200 Gene3D - 8 153 - -
Vra10g0463 200 PANTHER HEAT SHOCK PROTEIN 70KDA 145 197 IPR013126 GO:0005524|GO:0140662
Vra10g0463 200 PANTHER HEAT SHOCK PROTEIN 70KDA 4 144 IPR013126 GO:0005524|GO:0140662
Vra10g0463 200 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 128 193 IPR029048 -
Vra10g0463 200 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 144 - -
Vra10g0463 200 PANTHER HEAT SHOCK 70 KDA PROTEIN 145 197 - -
Vra10g0463 200 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vra10g0463 200 Gene3D - 62 109 - -
Vra10g0463 200 PRINTS 70kDa heat shock protein signature 8 21 - -
Vra10g0463 200 PRINTS 70kDa heat shock protein signature 38 50 - -
Vra10g0463 200 PRINTS 70kDa heat shock protein signature 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0463 Vra-Chr10 10507974 10509949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0463 1 144 Calmodulin-binding Proteins AT3G12580 65.217 1.69e-66 213