Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0461 ATGATACAGGTGGGGTGCATCGAGCCCGTCATGGTCCTCCGTGTCGACAAGGAAAAGGGTTACATCGATCTCAGAGAGCGTAAGGTCTACGAAGAGGATATTCAGGCCTACGAGGAGAGATACAACAAGAGCAAACTCGTCCACTCCATCATGCGCCAAATTGCTGAAATCCTCAACATCGATTTGGAGAACCCAGCATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCATACTTATACAAGCGGTGACTATGACCAATTGGGAGATGATTTAACAGTTGAGCTTATCACAAGGGTTGTTTGTCAACCAGCTAACTGGTGCCCAACTGCAAATGTACACTAA 348 0.4626 MIQVGCIEPVMVLRVDKEKGYIDLRERKVYEEDIQAYEERYNKSKLVHSIMRQIAEILNIDLENPACYSWNLLLELAFHTYTSGDYDQLGDDLTVELITRVVCQPANWCPTANVH* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0461 115 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 65 IPR011488 GO:0003723|GO:0003743
Vra10g0461 115 SUPERFAMILY eIF2alpha middle domain-like 29 63 IPR024054 -
Vra10g0461 115 Coils Coil 27 47 - -
Vra10g0461 115 Gene3D - 1 29 IPR012340 -
Vra10g0461 115 PANTHER BNAC04G04870D PROTEIN 1 65 - -
Vra10g0461 115 Gene3D Translation initiation factor 2; subunit 1; domain 2 31 82 IPR024054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0461 Vra-Chr10 10440551 10445469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0461 1 64 Eukaryotic Initiation Factors Gene Family AT2G40290 78.125 3.09e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0461 K03237 - vra:106754784 226.098