Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0455 ATGAGAAACTTCTCTGGGAATGTTATTTCAAGAGCATGCTTTGGAAGCAATTATACCAAGAGTGAAGAGATTTTCTTGAGATTNGTAGCTCTCCAAGAGTTATTGTCCTGGAAAAATATGTTAAGATTTATCCCTGGCATGAGCTACCTTCCAACAAAGACCAATAGAGAAATATGGACATTAGAAAAGGAGGTGAAAGAAATGATACTTCAGGTGGTGAAGGAAAGAAAGGAAACTACTTTTGAGAAGGACTTGCTACAAATGGTTCTTGAAAATGTTAAGGACAGTGAGCTAAGTAAAGAGGCCATTGACGATTTCATCGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTTCTGCTACATGGTGCCTGATGCTGCTGGCCGCAAACCCAGATTGGCAAGATCGTGTTCGTGCTGAGGTGATAGAAATTTGCAGGGGTAGAATCCCAGATTTTAGTATGCTTGGTAAGATGAAGCAGCTAGGAATGGTTATTCATGAAGCATTGCGGCTTTATCCTCCTGTGACTGTGGTGGCAAGAGAGGCCTTAAAGGACATGAAGTTTGGGAACCTTGATGTTCCAAAGGGGTTTAACCTTTGGATAATGGTAGTAAGTTTGTACACAAATCCTGATATATGGGGAGATGATGCCTACAAATTCAAGCCAGAAACGTGTACATGCCCTTTGGGGCTGGTCCACGAGTCTGTCTTGGACAGAACTTGGCTATTGTGGAACTTAAGATGA 762 0.416 MRNFSGNVISRACFGSNYTKSEEIFLRXVALQELLSWKNMLRFIPGMSYLPTKTNREIWTLEKEVKEMILQVVKERKETTFEKDLLQMVLENVKDSELSKEAIDDFIVDNCKNIYLAGYETTAVSATWCLMLLAANPDWQDRVRAEVIEICRGRIPDFSMLGKMKQLGMVIHEALRLYPPVTVVAREALKDMKFGNLDVPKGFNLWIMVVSLYTNPDIWGDDAYKFKPETCTCPLGLVHESVLDRTWLLWNLR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0455 253 PANTHER CYTOCHROME P450 714C2 1 229 - -
Vra10g0455 253 Pfam Cytochrome P450 4 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0455 253 PRINTS E-class P450 group I signature 4 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0455 253 PRINTS E-class P450 group I signature 106 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0455 253 PRINTS E-class P450 group I signature 126 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0455 253 PRINTS E-class P450 group I signature 168 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0455 253 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 229 - -
Vra10g0455 253 SUPERFAMILY Cytochrome P450 1 229 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0455 253 PRINTS P450 superfamily signature 117 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0455 253 PRINTS P450 superfamily signature 169 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0455 253 Gene3D Cytochrome P450 1 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0455 Vra-Chr10 10356772 10357990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0455 1 229 Cytochrome P450 AT5G24900 41.250 1.77e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0455 K24544 - vra:106774796 516.924