Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra10g0448 | ATGTATCTTTCAAAGAGTTTCAAGCTTGAAGTTGTTGTCATCCTGTGGTTTTGCTGCTATTTGCTACATGCTGCTGGGCAGAATAACATAACTAGTAATGTTGAAGTTGAAGCATTGATAGCCATTAAGAGTAGTTTGATTGATCCTAATGGAAATTTAAGCAATTGGAATCATGGAGACCCATGTACATCAAGGTGGAAAGGAGTTTTGTGCTTCAATGAAACACAGGAGGATGGCTATCTGCATGTTGAAGAATTGCAATTACTGAGTTTGCAACTGTCTGGAACCTTGGCACCAGAGCTTGGCAAATTAACATACATGAAAAGATTGAACTTTATGTGGAACAACATAAGTGGCAGTATCCCAAAGGAAGTTGGCAATATCAAATCTTTGGAACTATTGCTCCTGAATGGAAATAATTTAACAGGTCCACTACCAGAGGAGATTGGCTATCTTCCAAATCTGGATAGAATACAAATAGATCAGAACCATATATCAGGATCTCTTCCTACGTCATTTGCAAATCTGAACAAGACAAAGCATTTTCACATGAACAACAACTCACTCAGCGGGCAAATCCCACCAGAGCTTTCTCGATTACCAAATCTTGTTCACCTTCTTCTCGACAATAACAACTTATCTGGATATCTTCCCCCTGAGCTGTACAAGTTGCCAAATTTACTTATCATTCAACTTGATAACAATAACTTCGAAGGAAATAGTATTCCTGATACGTATGGCAACATGTCAAAGTTGTTGAAGATGAGCCTTAGGAATTGCAGTTTGACAGGACCAGTTCCTGACTTAAGCAGGATACCTCACCTTCTTTATCTTGACCTTAGTTTCAACCAGTTGAACGAATCAATTCCTGCCAATAAGCTTTCTGAGAATATCACAACCATTGATTTATCAAACAACCACCTAACTGGAAATATTCCATCTTACTTTGTTGATCTTCCACGTCTTCAGAAGTTGTCACTTGCAAACAATTCATTGAATGGCACTGTTTCATCCTCTATTTGGACGAATAAGACTTCAAATGGAACAGAAAACTTTCTTTTGGAGTTGCAAAATAATAGCCTTACAGCCATATCAGGAAGTATTGATCTTCCTCCAAATGTCACAGTTGTGCTTGATGGGAATCCCCTTTGCTCAAACAAAACCCTTGATCACTTCTGTGGACCTGAAGGTGCTACTGTAACAAATGGCTCATTCACTATAAACCCCAGTTCATGTAAACCTCAAGCATGCCCTCCTCCTTATGAGTACTCTGTTGATTGTTTCTGTGCACTTCCATTGCTTGTTGCCTATCGGCTGAAAAGTCCTGGATTTTCAGACTTTACTCCGTATTTGGATGATTTTGAGACCTACATGACTACTGGTCTTCAATTATCTACTGATCAGCTAGAATATACTTTTTATTGGCAAGCAGGACCTCGGTTGAGAATGGACTTGAAATTTTTTCCTCTATATGTTAATAACACTAGCAATCATACTTTCAATAGAAGTGAGCTCCTACGGATCACAAGCATGTTCACAGGATGGCTAATTCAAGACAGTGATCTGTTTGGACCTTATGAACTGCTTGGCTTCGATCTTTTGGGTCCTTACAAGGATGAAATTGGCAAGGATTCAAAATCAGGAATAAGCACAGGTGCACTGGTTGGCATAGTTGTAGGGGGAATTGCTTGTGCAGTGACATTATCTGCAATTGTTACCCTTCTTATATTGAGAATCAAAATGAGAGGTTACCATACTGTTTCAAAGCGACGTCAGGCATCTAAAATCTCTATAAAAATTGATGGTGTAAGGGCCTTTACTTATGGAGAATTGTCCTCCGCTACAAACAATTTCAACATTTCTTCTCAAGTTGGACAAGGTGGCTATGGGAAGGTTTATAAAGGGACTCTTTCTGATGGCACAGTTGTTGCCATAAAACGCGCTCAAGAGGGATCTCTGCAAGGTGAGAAGGAGTTCCTCACAGAAATATCATTACTATCAAGGTTACATCATCGCAACCTTGTTTCTCTGATTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCTAATGGCACATTGAGGGATCACCTTTCTGTTACAGCGAAAGAACCCCTGACTTTTGCCATGAGATTGAAGATTGCACTAGGGGCAGCTAAAGGCCTCATGTATCTACACACAGAAGCCGATCCTCCAATATTCCACCGAGACGTAAAGGCCAGCAACATATTGTTAGACTCTAAATTTTCGGCAAAAGTGGCTGATTTTGGACTTTCGCGTCTTGCCCCAGTTCCAGATATGGAAGGAGTTGTTCCTGGTCATGTATCTACGGTGGTAAAGGGGACGCCGGGGTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACAGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGATGCATCCTATCTCACACGGAAAAAATATTGTTAGAGAGGTTAATATTGCGTACCAATCAGGTGTAATATTTTCAATGATCGATGGACGCATGGGGTCCTATCCGTCTGAGCATGTAGAGAAATTTTTGACATTGGCCTTGAAGTGTTGCGAAGATGAGCCAGAGGCACGGCCTAGAATGGCAGAAGTGGTTAGAGAGCTTGAAAACATATGGTCTACAATGCCAGAATCAGATACCAAGAAAGCTGAATTTATGTCTAGTGATTCTGGCAAAACTGACATTCACAGTATACCATCTTCATCCTCTGCTTCTGCTATGAAGACTCCTTTTGTATCAGGAGATGTGTCTGGTAGCGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAG | 2856 | 0.4044 | MYLSKSFKLEVVVILWFCCYLLHAAGQNNITSNVEVEALIAIKSSLIDPNGNLSNWNHGDPCTSRWKGVLCFNETQEDGYLHVEELQLLSLQLSGTLAPELGKLTYMKRLNFMWNNISGSIPKEVGNIKSLELLLLNGNNLTGPLPEEIGYLPNLDRIQIDQNHISGSLPTSFANLNKTKHFHMNNNSLSGQIPPELSRLPNLVHLLLDNNNLSGYLPPELYKLPNLLIIQLDNNNFEGNSIPDTYGNMSKLLKMSLRNCSLTGPVPDLSRIPHLLYLDLSFNQLNESIPANKLSENITTIDLSNNHLTGNIPSYFVDLPRLQKLSLANNSLNGTVSSSIWTNKTSNGTENFLLELQNNSLTAISGSIDLPPNVTVVLDGNPLCSNKTLDHFCGPEGATVTNGSFTINPSSCKPQACPPPYEYSVDCFCALPLLVAYRLKSPGFSDFTPYLDDFETYMTTGLQLSTDQLEYTFYWQAGPRLRMDLKFFPLYVNNTSNHTFNRSELLRITSMFTGWLIQDSDLFGPYELLGFDLLGPYKDEIGKDSKSGISTGALVGIVVGGIACAVTLSAIVTLLILRIKMRGYHTVSKRRQASKISIKIDGVRAFTYGELSSATNNFNISSQVGQGGYGKVYKGTLSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDHLSVTAKEPLTFAMRLKIALGAAKGLMYLHTEADPPIFHRDVKASNILLDSKFSAKVADFGLSRLAPVPDMEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNIAYQSGVIFSMIDGRMGSYPSEHVEKFLTLALKCCEDEPEARPRMAEVVRELENIWSTMPESDTKKAEFMSSDSGKTDIHSIPSSSSASAMKTPFVSGDVSGSDLVSGVIPSIKPR* | 952 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra10g0448 | 951 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 9 | 922 | - | - | |
Vra10g0448 | 951 | Pfam | Leucine rich repeat N-terminal domain | 33 | 71 | IPR013210 | - | |
Vra10g0448 | 951 | MobiDBLite | consensus disorder prediction | 909 | 931 | - | - | |
Vra10g0448 | 951 | Gene3D | Ribonuclease Inhibitor | 31 | 296 | IPR032675 | - | |
Vra10g0448 | 951 | SMART | serkin_6 | 618 | 892 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra10g0448 | 951 | SUPERFAMILY | L domain-like | 45 | 391 | - | - | |
Vra10g0448 | 951 | CDD | STKc_IRAK | 624 | 890 | - | - | |
Vra10g0448 | 951 | Gene3D | Phosphorylase Kinase; domain 1 | 588 | 693 | - | - | |
Vra10g0448 | 951 | ProSiteProfiles | Protein kinase domain profile. | 618 | 892 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra10g0448 | 951 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 9 | 922 | - | - | |
Vra10g0448 | 951 | Gene3D | Transferase(Phosphotransferase) domain 1 | 694 | 912 | - | - | |
Vra10g0448 | 951 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 738 | 750 | IPR008271 | GO:0004672|GO:0006468 | |
Vra10g0448 | 951 | SMART | LRR_typ_2 | 272 | 297 | IPR003591 | - | |
Vra10g0448 | 951 | SMART | LRR_typ_2 | 152 | 175 | IPR003591 | - | |
Vra10g0448 | 951 | SMART | LRR_typ_2 | 319 | 343 | IPR003591 | - | |
Vra10g0448 | 951 | SMART | LRR_typ_2 | 200 | 224 | IPR003591 | - | |
Vra10g0448 | 951 | Pfam | Leucine rich repeat | 153 | 213 | IPR001611 | GO:0005515 | |
Vra10g0448 | 951 | Gene3D | Ribonuclease Inhibitor | 297 | 386 | IPR032675 | - | |
Vra10g0448 | 951 | MobiDBLite | consensus disorder prediction | 901 | 940 | - | - | |
Vra10g0448 | 951 | ProSitePatterns | Protein kinases ATP-binding region signature. | 624 | 646 | IPR017441 | GO:0005524 | |
Vra10g0448 | 951 | SUPERFAMILY | Protein kinase-like (PK-like) | 603 | 908 | IPR011009 | - | |
Vra10g0448 | 951 | Pfam | Protein tyrosine and serine/threonine kinase | 620 | 887 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra10g0448 | Vra-Chr10 | 10192674 | 10206639 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra10g0448 | 18 | 900 | Receptor kinase-like Gene Family | AT5G01950 | 59.487 | 0.0 | 1003 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Vra10g0448 | PK_Tyr_Ser-Thr | 3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra10g0448 | - | - | gmx:100786467 | 1625.14 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vra10g0448 | 10 | 10192674 | 10206639 | Vra10g0448 | 10 | 10192674 | 10206639 | ECH | |
Vra6g0813 | 6 | 8031881 | 8046562 | Vra10g0448 | 10 | 10192674 | 10206639 | PCT |