Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0439 ATGGCAGATTCCAATGTAGTTCTGCTGGATTTCTGGCCAAGCTCTTACGGAATGAGAGTGAAAATCGCTTTGGCAGAGAAGGGTATTTCGTATGAGTGCAAGCAAGAAGATTTAGAAGCTAAAAGCTCTCTGCTTCTAGAGATGAACCCCGTTCACAAAATGATACCAGTTTTGATTCATAATGCAAAACCCATCTGCGAGTCACTGAATATTGTTGAGTACATTGATGAGACATGGAAACACAAATCTTCTCTGCTTCCCTCAGACCCATACAAGCGATCCCAAGCCAGGTTTTGGGGCGATTACATTGACAAAAATGTATACAATGGTGTGAAGAGGGTATGGACGGGGAAGGGTAAAGAGCAAGAAGAGTGGAAGAAAGAATTGATAGAATGTTTGAAGAGGCTGGAAGATGAACTTGGAGACAAGGCATATTTTGGTGGTGAAGAGTTTGGGTATGTGGATGTGGCTCTTGTTCCTTTCACTAGCTGGTTTTACACTGTTGAGACGTTTGGGAAACTAAGCATTGAAGATGAGTGTCCAAAACTTGTGGCTTGGGCCAAAAGGTGCATGCAGAAAGAGACTGTGGCCTCATCACTCCCTCACCATCAACAGATCTATGCTTTTGCCCTGCAATATAAACACAGACATGGAATTCAGTAG 663 0.4314 MADSNVVLLDFWPSSYGMRVKIALAEKGISYECKQEDLEAKSSLLLEMNPVHKMIPVLIHNAKPICESLNIVEYIDETWKHKSSLLPSDPYKRSQARFWGDYIDKNVYNGVKRVWTGKGKEQEEWKKELIECLKRLEDELGDKAYFGGEEFGYVDVALVPFTSWFYTVETFGKLSIEDECPKLVAWAKRCMQKETVASSLPHHQQIYAFALQYKHRHGIQ* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0439 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Vra10g0439 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Vra10g0439 220 Gene3D - 89 220 - -
Vra10g0439 220 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Vra10g0439 220 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Vra10g0439 220 CDD GST_N_Tau 6 79 - -
Vra10g0439 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 216 IPR045073 -
Vra10g0439 220 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Vra10g0439 220 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vra10g0439 220 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Vra10g0439 220 Gene3D Glutaredoxin 1 88 - -
Vra10g0439 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Vra10g0439 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 216 - -
Vra10g0439 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0439 Vra-Chr10 10074295 10075296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0439 1 220 Glutathione S-transferase Gene Family AT1G17180 59.545 3.72e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0439 K00799 - gmx:100527221 392.889