Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0434 ATGGATTTCGCCCCCATGCACCTTCAATGGCTTCTCATTTCTTCATTTGTTGTGATTTGTGGTTTTACCATCATCAGAGTCTTCAGATATCACATTACTCAGAAGCCTAAACTGCCTCCAGGTCCTAAACCCTGCCCTATACTTGGTAACCTTCCTCAAATGCTTTCAAACAAACCTGTATTTCGATGGATACACAATCTCATGCAAGATATGAACACTCAAATTGCATGCATTCGTCTAGGAAATGTCCATGTAATCCCAGTCACGTGTCCTTCCATTGCTTGTGAGTTTTTGAGAAAGCATGATGCTGAGTTTGCTTCAAGACCACTGACCATGGCCACTGATATCATGTCCAGTGGTTATAAGACCATAGCTATTGTACCCTTTGGGGAACAATGGAAGAAAATGAGGAGAATCTTCGTGAACGACTTGTTCTCCCCTCTCAGGCACCACTGCTTTCAACACAAAAGGAACGAAGAAGCTGATAACATTATGTTTTATGTCTACAACAAATGCAACAATGTGAAGGATGGGGGGCTAGTGAATGTCAGAGATGTTNCACAGCACTATTGCTGCAATGTGACGAGGAAGTTGATTTTTAATACAAGGTACTTTGGAAAGGGTAGGTTGGATGGAGGGCCAGGGCCAGAAGAAGTAGAACAAGTGAATACTATTTTCACATTGCTTAAACACGTTTATGCATTTTCTGCTTCTGATTATCTGCCATGGTTGAGGGTTTTTGATTTGGATGGGCACAAGAGGAAGGTGAAGAAAGCAATGAGNACGATGGAGAAATATCATGATCCAATGATTGAAGAGAGAATGAAGCAATGGAAGAATGGAGCAAAGAACGTTCAAGAAGACTTGTTGGATGTTCTGATCTCACTCAAAGATGACAATGGCAATCCTACTCTCACAATGAAGGAAATCAAGGCTCTTACTATAGAACTTATGCTTGGAGGAGCAGACAATCCATCAAATGCAGTTGAATGTGTTCTTGCAGAAATGATAAGTCAGCCCCATATACTTCAGCAAGCTACTGATGAACTTAACAAGGTTGTGGGTAAGCAAAGGATGGTACAAGAATCAGACATTCCAGAGCTCAATTATGTAAAGGCTTGTTTGAGAGAAGCCTTTCGCCTTCATCCTGTGGTACCTTTTAATCCTCCCCATGTCTCGAGCAACGACACAATGGTGGGAAACTATTTTATTCCAAAGGGTAGCCATGTACTACTAAGCAGACATGGACTTGGACAAAACCCTAATGTGTGGAATGAAGCAGACAAGTTCAAACCTGAACGTCATCAAAAGAGTGATGGATCTATGGTTGTTTTGTCAGAACCAGATTTGAAGTTCATATCATTTGGCACAGGAAGACGAGGTTGTCCTGCAGTTATACTTGGTTCCACCATGGCTGTGATGTTATTGGCCAGGCTGATCCATGCATTTTCCTGGAATGCACCTCCAAATTTATCAAGTATCAACACTCTTAAGTCTGATAATGGTGGTATGCTTGCTGAACCACTTGTGTTAGAAGCCAAACCAAGATTAGCATCAGAGTTCATATGGTTGCTGCAAGAAGTTCCAATCGCAAATTTGAAGTGCCCCCATTCAGCTCCTGCAAAGTCATCAAGGATGTCAAGGATGAACTTTATTTCGTCATCATCACTCAAGATGACTGACAAGAAGGTCCAAATTAAACCTCTTTCTAAGGTTGCAGCAACCCCCAATGCTAAGGTGAGGCCATCAGCTCCGGTGGCCAAGGCCTTGACCACTCCAAGGAATAATCAAAAGAAGGTTGACTGTTGGTATGCCTAA 1818 0.4213 MDFAPMHLQWLLISSFVVICGFTIIRVFRYHITQKPKLPPGPKPCPILGNLPQMLSNKPVFRWIHNLMQDMNTQIACIRLGNVHVIPVTCPSIACEFLRKHDAEFASRPLTMATDIMSSGYKTIAIVPFGEQWKKMRRIFVNDLFSPLRHHCFQHKRNEEADNIMFYVYNKCNNVKDGGLVNVRDVXQHYCCNVTRKLIFNTRYFGKGRLDGGPGPEEVEQVNTIFTLLKHVYAFSASDYLPWLRVFDLDGHKRKVKKAMXTMEKYHDPMIEERMKQWKNGAKNVQEDLLDVLISLKDDNGNPTLTMKEIKALTIELMLGGADNPSNAVECVLAEMISQPHILQQATDELNKVVGKQRMVQESDIPELNYVKACLREAFRLHPVVPFNPPHVSSNDTMVGNYFIPKGSHVLLSRHGLGQNPNVWNEADKFKPERHQKSDGSMVVLSEPDLKFISFGTGRRGCPAVILGSTMAVMLLARLIHAFSWNAPPNLSSINTLKSDNGGMLAEPLVLEAKPRLASEFIWLLQEVPIANLKCPHSAPAKSSRMSRMNFISSSSLKMTDKKVQIKPLSKVAATPNAKVRPSAPVAKALTTPRNNQKKVDCWYA* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0434 605 Pfam Cytochrome P450 39 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 11 521 - -
Vra10g0434 605 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Vra10g0434 605 SUPERFAMILY Cytochrome P450 39 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 Gene3D Cytochrome P450 32 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0434 605 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0434 Vra-Chr10 10001530 10004892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0434 33 518 Cytochrome P450 AT5G05260 53.862 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0434 - K12153 vra:106774791 1224.92