Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0433 ATGGACCACACCCCATTTCTTATGTTGTCAAATCTTCAAAGCTTTTGGCCATCTTTGGTTGTCATAATCACCTGCTTCACCATTATGATCAAAACTCTAAGGTCTAGCTTTATTCAGACTTATTCTAAGAAACAAATGCCAAAGCTCCCTCCTGGACCCAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAACAAACCTGTTTATAAGTGGATACATAATCTCATGAAACAAATGAACACTGATATTGCATGTATCCGCTTAGGAAATGCCTATGTCATCCCAGTCACGTCTCCCTCCATTGCTACTGAGTTCTTGAGAAAACAAGATGCTACTTTTGCATCAAGATCACTCAGCATGTCCAGTCATCTCATTTCTAATGGATATTCAACAACAATTTTTGTGCCCTTCGGTGACCAGTGGAAGAAAATGAGGAAAATCGTAACCAACGATTTGCTTTCTCCACATAAGCACCTATGGCTTCACGACAAAAGAACAGAAGAGGCCGACAACCTTATGTTTTACGTCTACAACAAGTGCAAAATGGTGAGCGATGGTTCTTATGGCCTTGTGAATGTTAGGAATGCTTCACGACATTATTGTGGCAACCTCATCAGAAAAATTACTTTCAATGTAAGGTATTTTGGGGAGGGTAGAAAGGACGGAGGAGCCGGTTTTGAAGAAGTAGAACATCTTGATTCTGTCTTCGATTTGCTCAACTACATATATTCCTTTTCTGTTTCTGATTATATGCCATACTTGAGGAGACTTGATTTGGATGGCCAAGAGAAGAAAGTGAGGGAAGCTTTGAGGATCATTAAGAAGTATCATGATCCCATCATTCAACAAAGAATCAAACAATGGAATGATGGATTAAAGATTGATGAAGAGGACTGGCTTGATGTTCTCATCTCACTCAAAGATGCCAACAATAATCCATCGTTAACATTCGAAGAGATCAGTGCACAAATCATAGAATTGATGATTGCAACAGTGGACAATCCATCCAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAGCCTGAGTTGCTGCGTCGAGCTGTTGAAGAATTGGACAGTGTGGTTGGAAAAGACAGGCTGGTCCAAGAATCAGACATACCTAAGCTTAACTATGTGAAGGCATGTGCCAAAGAAGCTTTTCGTCTTCATCCCATTGCACCTTTCATTCCTCCTCATGTCTCTATGAGTGACACTGTTGTGGGGAATTACTTCATCCCTAAGGGTAGCCACGTAGTGCTAAGCAGACAAGAACTTGGAAGAAATCCAAAAGTGTGGGATGAACCCTACAAGTTCAAACCTGAACGCCACCTGAAGAGTGATGCAGATGATGTGGTTTTGACTGAACCAAATCTGAAGTTCATATCATTCAGCACAGGAAGACGAGGTTGTCCTGGAGTGATGTTAGGAACGACAATGACAGTGATGCTATTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCCGATGTTTCAACAATCAATCTTTCTGAGTCAGAGGATGATATCCTTCTTGCACATCCACTCGTGGCAATTGCTCAGCCAAGGTTACCATCAAAGCTATACCAACTCTAA 1614 0.4164 MDHTPFLMLSNLQSFWPSLVVIITCFTIMIKTLRSSFIQTYSKKQMPKLPPGPKPWPIVGNLPEMLANKPVYKWIHNLMKQMNTDIACIRLGNAYVIPVTSPSIATEFLRKQDATFASRSLSMSSHLISNGYSTTIFVPFGDQWKKMRKIVTNDLLSPHKHLWLHDKRTEEADNLMFYVYNKCKMVSDGSYGLVNVRNASRHYCGNLIRKITFNVRYFGEGRKDGGAGFEEVEHLDSVFDLLNYIYSFSVSDYMPYLRRLDLDGQEKKVREALRIIKKYHDPIIQQRIKQWNDGLKIDEEDWLDVLISLKDANNNPSLTFEEISAQIIELMIATVDNPSNAFEWALAEMINQPELLRRAVEELDSVVGKDRLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTVVGNYFIPKGSHVVLSRQELGRNPKVWDEPYKFKPERHLKSDADDVVLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPDVSTINLSESEDDILLAHPLVAIAQPRLPSKLYQL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0433 537 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 535 - -
Vra10g0433 537 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 16 535 - -
Vra10g0433 537 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 SUPERFAMILY Cytochrome P450 50 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 Pfam Cytochrome P450 50 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 Gene3D Cytochrome P450 41 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0433 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0433 Vra-Chr10 9973605 9975506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0433 8 535 Cytochrome P450 AT4G39950 53.308 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0433 - K14984 gmx:100809902 924.08