Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0430 ATGAACCATCCAATTTTTCTCTCAAAGTACTTCACCATAGCCAAGTTAAACATAAGCACTTCAACTTTCAAAACCATGGCTCAAACCCCATTTCTTCTGTTGTCAAATCTTCAAAGCTTTTGGCCTTCTTTGGTTGTGATAATCACCTGCTTCACCATTATGATCAAAACCCTAAGCTCTAACTTCATTCAGACTTATTCTAAGAAACAAAATCCAAACCTCCCTCCTGGACCCAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAGCAAACCTGCTTATAAGTGGATACATAATCTCATGAAACAAATGAACACTGATATTGCTTGTATCCGCTTAGGAAATGCCTATGTCATCCCAGTCACNTCTCCCACCATTGCTACCGAGTTCTTGAGAAAACAAGATGCTACTTTTGCATCAAGATCACTCANCATGGCCAGTGATCTCATTACTAGTGGATATTCAACAACAATTTTTGTGCCCTTTGGTNACCANTGGAAGAAAATGAAGAAAATCATAACCCACGATTTGCTTTCTCCACACAAGCACCTATGGCTTCACGACAAAAGGATGGAAGAGGCTGACAACCTTATGTTCTACGTCTACAACAAGTGCAAAATGGGGAATGATGGTGTTTCTGGCCTTGTCAATGTTAGGAGTGCTGCAAGGCATTATTGTGGAAACCTTATCAGAAAAATTACTTTTAATGTAAGGTATTTTGGGGATGGTAGAGAGGATGGAGGGCCCGGCTTTGAAGAAGTAGAACATGTTGATTCCATCTTTGATTTGCTCAACTACGTTTATTCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGATTTGGATGGCCATAAGAAGAAAGTGAAGGAAGCTTTGAGGAACATTAAGAAGTATCATGACCCCATCGTTCACCAGAGAATCAAACAATGGAATGATGGTTTAAAGGTTGATGCAGAGGATTGGCTTGATGTTCTCATCTCACTCAAAGATGCCAACAATAATCCATCGTTAACATTCGAAGAGATCAGTGCACAAATCATAGAATTGATGCTTGCAACAGTGGACAATCCATCCAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAGCCTGAGTTACTGCGTCGAGCTGTTGAAGAATTGGACAGTGTGGTTGGAAAAGACAGGCTGGTCCAAGAATCAGACATACCTAAGCTCAACTATGTGAAGGCATGTGCCAAAGAAGCTTTTCGTCTTCATCCCATTGCACCTTTCATTCCTCCCCATGTCTCTATGAGTGACACTGTTGTGGGGAATTACTTCATCCCTAAGGGTAGCCACGTAGTGCTAAGCAGACAAGAACTTGGAAGAAATCCAAAAGTGTGGGATGAACCCTACAAGTTCAAACCTGAACGCCACCTGAAGAGTGATGCAGATGATGTGGTTTTGACTGAACCAAATCTGAAGTTCATATCATTTAGCACAGGAAGACGAGGTTGTCCCGGTGTGATGTTAGGAACGACAATGACAGNGATGCTTTTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCCGATGTTTCAACAATCAATCTTTCTGAGTCAGAGAATGATATCCTTCTCGCTCAGCCACTCGTGGCAATTGCTCAGCCAAGGTTGCCACAAAAGCTATACCAACTGTAA 1689 0.4192 MNHPIFLSKYFTIAKLNISTSTFKTMAQTPFLLLSNLQSFWPSLVVIITCFTIMIKTLSSNFIQTYSKKQNPNLPPGPKPWPIVGNLPEMLASKPAYKWIHNLMKQMNTDIACIRLGNAYVIPVTSPTIATEFLRKQDATFASRSLXMASDLITSGYSTTIFVPFGXXWKKMKKIITHDLLSPHKHLWLHDKRMEEADNLMFYVYNKCKMGNDGVSGLVNVRSAARHYCGNLIRKITFNVRYFGDGREDGGPGFEEVEHVDSIFDLLNYVYSFSVSDYMPCLRGLDLDGHKKKVKEALRNIKKYHDPIVHQRIKQWNDGLKVDAEDWLDVLISLKDANNNPSLTFEEISAQIIELMLATVDNPSNAFEWALAEMINQPELLRRAVEELDSVVGKDRLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTVVGNYFIPKGSHVVLSRQELGRNPKVWDEPYKFKPERHLKSDADDVVLTEPNLKFISFSTGRRGCPGVMLGTTMTXMLFARLLHGFTWTAPPDVSTINLSESENDILLAQPLVAIAQPRLPQKLYQL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0430 562 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 41 560 - -
Vra10g0430 562 Gene3D Cytochrome P450 62 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 41 560 - -
Vra10g0430 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506|GO:0016705
Vra10g0430 562 SUPERFAMILY Cytochrome P450 75 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 Pfam Cytochrome P450 75 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PRINTS E-class P450 group I signature 129 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PRINTS E-class P450 group I signature 228 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PRINTS E-class P450 group I signature 347 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PRINTS E-class P450 group I signature 367 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PRINTS E-class P450 group I signature 451 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0430 562 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0430 Vra-Chr10 9926910 9928752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0430 11 560 Cytochrome P450 AT4G39950 51.180 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0430 - K14984 gmx:100809902 934.095