Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0415 ATGAATGCTGAAACCACTATTGACGTGGTTTTTGAAGGTTCCGCCGTTCCTTTGGCTAATCTTTGTTATTGTTTGGGTTGCAGAAAAGTGGTGAGGTTGTCGATTGCCCAGGTTTTAACTGTGATTTCTCATAAGCAAAAGGTCGCGTTGATGGATGCCTACAAGAACAAAAAGTACTTTCCCCTTGATCTCCGCCCNAAGAAGACCAGGGCTATTCGCAAGAGGCTTACTAAGCACCAGAAAGGTTCTTTTATCCCGATTGAAAGTCAGCGACATTCGTACTTGTCTCTGTCAATCTTTACATACAATGCTAAGTAA 318 0.4245 MNAETTIDVVFEGSAVPLANLCYCLGCRKVVRLSIAQVLTVISHKQKVALMDAYKNKKYFPLDLRPKKTRAIRKRLTKHQKGSFIPIESQRHSYLSLSIFTYNAK* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0415 105 Gene3D - 10 58 IPR036049 GO:0003735|GO:0005840|GO:0006412
Vra10g0415 105 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 27 98 - -
Vra10g0415 105 Gene3D - 59 101 - -
Vra10g0415 105 PANTHER 60S RIBOSOMAL PROTEIN L35 27 98 IPR045059 GO:0000463|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0415 Vra-Chr10 9663985 9664855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0415 27 95 Cytoplasmic Ribosomal Protein Gene Family AT5G02610 68.116 1.32e-24 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0415 K02918 - sly:778319 95.5153