Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0373 ATGTTCTTGACATGCAACTGGAATCAGTGTCTGTTCCCTGTTGATGTAGTGTTCATTCAAATCAAAGGGCTGAAGAAGATGATAAAGAAGGAGAATTCCCGGGTGTTTATGGATGTGTCCATTGATGGGGATCCTGTTAAAAGGATGGTTTTCAAGCTTTTATACAATGTTGCTCCCATGACTGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGTATCAGTCAAAATACTGGAAAACCACTTCACTACAAGGGTTCTTTCTTCCATCAGATAATAAAAGGTTCTATTGTGAAGGGGGGAGATTTTGTCAATCGAAATGGGACAGGTGGAGAAAGTATATATGGTTCAGAGTTCCCGGATGAGTCACCTGTGCTGAAGCATGATGCTCCAGGCCTTCTATCAATGGCAATTGCAAACCGTGACACTCTTGGTTCTCATTTTATTATCACCTTGAAAGCCGATCATCATCTTGATGGGAATCATGTAGTCTTTGGGAAGCTTGTACATGGGCGTGATGTATTAAGGAAAATTGGAGAAATGGGTGATGAAGAAGGGCATCCAACTGTAATTATTAAAATCATTACATGTGGCGAATATAGTAAGGATAGAAAGAGGGTATATAAATCAAAAATGGGAGAAACCAATAATTACGAAACTCGGAAGAAGGGAAAACATAAGAAATCTTCAAAAGACCGAAGGAAAAGGAAAAGATACTACTCATCTGAATTTGGGAGCTCTTCAGATTGTGACACAGAATCTTTACGATCAGAGGAACTTTGGCAAATGGTTTCAGCAATGTTTGAAGACCAACGGGAAGAGTCATCCGAAGCTTATAATCAAGTAAGACTGGCGATAGGAAAAAATAAGAAATCTTCAAAAGAGAGAAGGAAATGGAGAAAATACTACTCATCTGAATCTTCAGAAGCCGAGATAAATAAATCAAAAATGGGAAATAATGGATTTTCTGAGGAGATAAATAAACCAGAAATGGAAACGGATGGGTTTTCTGCGGCACATCATGGGACATTGGATAAGGGAAAACGTTTAAAATACGCAGAAGAGGACCGGGAATGGATAGAAATCTTCTCAGAAAGCTCTTCAGATTATTACAATAAAGTTTCCGCTGACTCAGATATGTCCTCATCATCCGGCATATATTCTTAA 1170 0.3863 MFLTCNWNQCLFPVDVVFIQIKGLKKMIKKENSRVFMDVSIDGDPVKRMVFKLLYNVAPMTAENFRALCTGEKGISQNTGKPLHYKGSFFHQIIKGSIVKGGDFVNRNGTGGESIYGSEFPDESPVLKHDAPGLLSMAIANRDTLGSHFIITLKADHHLDGNHVVFGKLVHGRDVLRKIGEMGDEEGHPTVIIKIITCGEYSKDRKRVYKSKMGETNNYETRKKGKHKKSSKDRRKRKRYYSSEFGSSSDCDTESLRSEELWQMVSAMFEDQREESSEAYNQVRLAIGKNKKSSKERRKWRKYYSSESSEAEINKSKMGNNGFSEEINKPEMETDGFSAAHHGTLDKGKRLKYAEEDREWIEIFSESSSDYYNKVSADSDMSSSSGIYS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0373 389 Gene3D - 20 201 IPR029000 -
Vra10g0373 389 SUPERFAMILY Cyclophilin-like 29 204 IPR029000 -
Vra10g0373 389 MobiDBLite consensus disorder prediction 212 252 - -
Vra10g0373 389 MobiDBLite consensus disorder prediction 328 342 - -
Vra10g0373 389 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 199 IPR002130 GO:0000413|GO:0003755
Vra10g0373 389 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 27 331 - -
Vra10g0373 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 53 68 IPR002130 GO:0000413|GO:0003755
Vra10g0373 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 90 102 IPR002130 GO:0000413|GO:0003755
Vra10g0373 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 133 148 IPR002130 GO:0000413|GO:0003755
Vra10g0373 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 160 IPR002130 GO:0000413|GO:0003755
Vra10g0373 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 176 IPR002130 GO:0000413|GO:0003755
Vra10g0373 389 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 36 200 IPR002130 GO:0000413|GO:0003755
Vra10g0373 389 MobiDBLite consensus disorder prediction 310 342 - -
Vra10g0373 389 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 27 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0373 Vra-Chr10 8916581 8922014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0373 51 196 U-box Gene Family AT5G67530 37.162 2.30e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0373 K09566 - gmx:100800303 359.377