Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra10g0359 | ATGGCAGAGCAGAGTTTGGATTGGTGGAAGGAATTGAGTCAGGATTGGTATGACTTGATTGATGNGCCATTNGACAACTTTAGTGTTCCAACCGCCTTTCCTAACAATGTTCTTCCGACCGTTGACGAAGCTCCGCAGATGTTATCATCGTCTCAAACATTGGAACACATGCAGTTTCATTCGAACAAAGGAAAAAGGATAACATGGACAAAAGAGGAGCATAGGAGGTTTTTAGAAGGACTTTATAGGTATGGAAAAGGAAATTGGAAAAACATTTCAGCCTACATTCAAACAAAGAGTACAAGTCAAGTGGCAAGCCATGCACAAAAGTACTTTATCCGTCAAAGTAAATCAAAAGAGCAAAAGAAGAGAAAAAGCATTCATGACATGGTTATGGAGAATACTACTCATACTAATGTTCATATTCAAAATTCATCATATAATAGAAATCTTGCAAGTTCAGAATTTTACGAAATGCAACCCTTCAATCCTTACATGAACATGTCTGATCCAGAAGAGCTAAATCATATGAATATGACTTATCAACCACGAGAAGAAATGATGAACCAAAATCATATGAATTCCAACAACATATTTGATCATCCTGCAAACTTTAATCAAATGCAACACTCGCAAGCCATATCCTTCAATCCTTACATCAACATGCCTCATCCACCAGAGTTAAATCATATCAATACCTTAAATCATCATCCACAAAATAATGGAATAGATCCCACACAGTTTAATCAAATGCAACCACCATTTTAG | 768 | 0.3633 | MAEQSLDWWKELSQDWYDLIDXPXDNFSVPTAFPNNVLPTVDEAPQMLSSSQTLEHMQFHSNKGKRITWTKEEHRRFLEGLYRYGKGNWKNISAYIQTKSTSQVASHAQKYFIRQSKSKEQKKRKSIHDMVMENTTHTNVHIQNSSYNRNLASSEFYEMQPFNPYMNMSDPEELNHMNMTYQPREEMMNQNHMNSNNIFDHPANFNQMQHSQAISFNPYINMPHPPELNHINTLNHHPQNNGIDPTQFNQMQPPF* | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra10g0359 | 255 | Pfam | Myb-like DNA-binding domain | 68 | 112 | IPR001005 | - | |
Vra10g0359 | 255 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 59 | 252 | - | - | |
Vra10g0359 | 255 | SUPERFAMILY | Homeodomain-like | 63 | 117 | IPR009057 | - | |
Vra10g0359 | 255 | Gene3D | - | 67 | 117 | - | - | |
Vra10g0359 | 255 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 65 | 116 | IPR017930 | - | |
Vra10g0359 | 255 | ProSiteProfiles | Myb-like domain profile. | 61 | 112 | IPR001005 | - | |
Vra10g0359 | 255 | MobiDBLite | consensus disorder prediction | 227 | 255 | - | - | |
Vra10g0359 | 255 | CDD | SANT | 68 | 112 | IPR001005 | - | |
Vra10g0359 | 255 | SMART | sant | 65 | 114 | IPR001005 | - | |
Vra10g0359 | 255 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 65 | 115 | IPR006447 | GO:0003677 | |
Vra10g0359 | 255 | MobiDBLite | consensus disorder prediction | 232 | 249 | - | - | |
Vra10g0359 | 255 | ProSiteProfiles | SANT domain profile. | 69 | 116 | IPR017884 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra10g0359 | Vra-Chr10 | 8639120 | 8640025 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Vra10g0359 | Myb_DNA-binding | 6.1e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra10g0359 | - | - | vra:106774767 | 529.635 |