Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0327 ATGGAGACTCGGGTTGAAGGGAAACCTACTCGTCTTGCATCAGGGTTCTCAGATAACTTGTCTGACACTTGCAAGATGGGTACTCCAAATGGAAGAGGAATGCACAAGTACGATGATGAAATTCCTTTTGACTCCGAAATAAATTATCACCAGTCAGAATCTAGTCTGGTGGAGGTACTTGGATCACATTCTGGAGAATCTCTTACTGTTCATCATGAAACGCTGGCTGGTATTGTTTATAGGAGCATACGAGTTGTGATTTTCTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTGCAGAAGTTGACTGCTCATCTTGGTTGGGTCTTTGCTCTGAGTTTGTTGGGTATAATGCCTATGGCGGAGCGGTTAGGTTATGCTACCGAGCAGCTGGCATTTTACAGTGGAGATACTGTTGGGGGTCTTTTAACTGCTACATTTGGAAATGCAACAGAATTGATCATCTCAATATATGCACTGAAAAGTGGAATGACACGGGTTGTCCAGCTCTCTTTGCTGGGATCAATTTTGTCCAATATGTTACTAGTGCTTGGATGTGCATTCTTATGCGGTGGGATTGTTAATCATAAGAAAGAACAAGTGTTTAACAAGGCAACAGCTTCTGTGAATTCAGGATTATTGTTGATGGCAGTCATGGGCATACTTTTCCCAGCTGTTCTACACTACACACATACCGAGGTTCATGTTGGGAAGTCAGAGTTGTTCCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACCTGTTTTTTCAGTTAAAAAGTCAAAGAAGTCTCTATGTCTCTGTGAACGAGGAAGAGGGTCAGAGTGGAAACGACTCAAATGACGATGAATCACCAGATATTTCGAAATGGGAATCAATAATATGGCTTTCCGTTATGACTGCTTGGATTTCAATCTTGTCTGAATACTTGGTTGGCGCTATAGAGGGAGCATCTACTGCATGGGACATTCCAATTGCATTTATCAGTGTCATATTGCTTCCACTAGTGGGGAATGCGGCTGAGCATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCCTAGGGGTTGCAATAGGCTCATCCACACAGATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATGGGGAACTCTATGGACTTGAACTTTCAACTATTTGAAACTGCAGCACTATTTCTTACTGTTATAGTTGTAGCCTTCATGTTGCAGGAAGGAACTGCTAATTACTTCAAAGGATTAATGCTTATTCTTTGCTATCTGATTGTGGCTGCCAGTTTTTATGTACATATAGATTCCTCTGAATAG 1362 0.4141 METRVEGKPTRLASGFSDNLSDTCKMGTPNGRGMHKYDDEIPFDSEINYHQSESSLVEVLGSHSGESLTVHHETLAGIVYRSIRVVIFSNKLNLLMPFGPLAILVQKLTAHLGWVFALSLLGIMPMAERLGYATEQLAFYSGDTVGGLLTATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHKKEQVFNKATASVNSGLLLMAVMGILFPAVLHYTHTEVHVGKSELFLSRFSSCVMLVAYAAYLFFQLKSQRSLYVSVNEEEGQSGNDSNDDESPDISKWESIIWLSVMTAWISILSEYLVGAIEGASTAWDIPIAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIMGNSMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHIDSSE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0327 453 Gene3D - 141 282 IPR044880 -
Vra10g0327 453 Gene3D - 290 447 IPR044880 -
Vra10g0327 453 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 29 452 IPR004713 GO:0006812|GO:0008324|GO:0016021
Vra10g0327 453 TIGRFAM caca2: calcium/proton exchanger 83 445 - -
Vra10g0327 453 Pfam Sodium/calcium exchanger protein 304 444 IPR004837 GO:0016021|GO:0055085
Vra10g0327 453 Pfam Sodium/calcium exchanger protein 112 269 IPR004837 GO:0016021|GO:0055085
Vra10g0327 453 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 29 452 - -
Vra10g0327 453 TIGRFAM cax: calcium/proton exchanger 96 446 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0327 Vra-Chr10 7997973 8002923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0327 25 453 Antiporters AT1G55730 69.907 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0327 K07300 - gmx:100799276 810.831