Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0318 ATGCTTGCCCTTCCACCACCACCTCCTCCACCACCCCTAGCCACAAGAAAACAAACCAAGCAAGTGTCTCCTGATCAAATTGTCATATCAAAACAGCCCGTCAAACAACATTCTCAGGAACCAGAAGCACCAAATTATGTTGCAACAAAGTCAATTAGGCCACCACCACCACCACCACTAAGGCAGCCTCCATTTCAAAGGACCAACCCCATCATATGGTTTGCTGCAGTGTTGTGTCTCATATTCAGCCTTGTGCTTATCTTCTTTGGAGTTGCAACTTTGATCATCTTCCTAGGCATCAAACCAAGGAACCCCACTTTTGACATCCCCAATGCAAACCTTAATTCAGTGTACTTTGACTCACCAGAATACTTCAATGGTGATTTCACCCTCCTTGCAAACATCACCAACCCCAATAGGAAGATTGATGTGAGGTTTGAGTCCTTGGATGTTGAACTTTTCTTCTCAGACAGCATCATATCAACACAGTCTATTCAGCCCTTTACTCAGAGGAGAAGGGAGAGCAGGTTGGAATCACTGCACTTCATATCCAGCTTGGTGTTTTTGCCTAAGGATCTTGGTGTGAACCTTAAAGGACAGGTGCAAAGTAACATGGTCAAGTACAATGTGAGAGGAACCTTTAAAGTGAGAGTAACTATGGGGTTATTCCACTTGTCTTACTGGTTGCATAGCAGATGCCAGATAGAGATGACTGCTCCACCAACTGGTGTCTTGGTGGCTAGGAAGTGCATCACCAAGAGATGA 765 0.4484 MLALPPPPPPPPLATRKQTKQVSPDQIVISKQPVKQHSQEPEAPNYVATKSIRPPPPPPLRQPPFQRTNPIIWFAAVLCLIFSLVLIFFGVATLIIFLGIKPRNPTFDIPNANLNSVYFDSPEYFNGDFTLLANITNPNRKIDVRFESLDVELFFSDSIISTQSIQPFTQRRRESRLESLHFISSLVFLPKDLGVNLKGQVQSNMVKYNVRGTFKVRVTMGLFHLSYWLHSRCQIEMTAPPTGVLVARKCITKR* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0318 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 32 254 - -
Vra10g0318 254 MobiDBLite consensus disorder prediction 16 45 - -
Vra10g0318 254 MobiDBLite consensus disorder prediction 1 15 - -
Vra10g0318 254 Pfam Late embryogenesis abundant protein 134 232 IPR004864 -
Vra10g0318 254 MobiDBLite consensus disorder prediction 1 61 - -
Vra10g0318 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 32 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0318 Vra-Chr10 7867431 7868797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0318 - - gmx:100803431 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0318 10 7867431 7868797 Vra6g0108 6 766101 767275 PCT