Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0292 ATGGCCGTGAACAATCGCTGTTTTGTGGAATGGAAAGAGCAGTTTGTTTCACAGGAGCGTGGTAATCGTGTGGTTCACTATTACCTAAAGGATGCTGCCGGAGAATCTATCCTTGCAGTGGTGGGTACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAATTTGTGGTAAGGAAGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTGGATTGGCTGACATCAACGCTATCAAAGCAGAACCTGCAAGGAGATAGAAGTGTATCACCTGGTCATAACATGGTTCAAGCTCATGAGACCACAAATGATAGTATCAACGGAATTACTGGAGCACGATTAACAGATGATAAGGACTTCCCTATGAGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCATGGAGATGTGGCAAACAACTTAAGCATTTTCCTGCTTTTTGGAGGAATGGCATCAAAATAGAGATTCAATCCTTTGTTTTTGTTATGGGCAAGGGAGAGAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGAAGGGGGCAAAAAAAGGTCAAGGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTACGAAATCCTCACCCTCGAGAAGTTTTTATCACACCTTGTTCTCAAGTTATTAGTGCAGAGTGCGTAGATGGTCCTGCCACAGTCTTGACTCGTGAACACTATGAAAAGTGCATGTCTTTTTTTACACCCACTTCAAGAGACAGAACACATTTGTGCTTTAGGCAATTTAGAAGCAACAAAGTTAAGCCCTTTGACTTGAGTAAACTACGTGGCTACTATGCCCAACCAATTCTTTCTTACTTGCACCTTGATTCAATCCAGAACCCTGAGAGGCTTGCAGGAGAAAATGAAGACTTGACTGCATGTGATGATGTGAAGGTAGGAGCCAAGAGGAGCAGAAGTGATAAGGGGTCTCCTCAGTCTTGGATAAGTCAACAGGGAGTTAGGAAATTGATGAGAAGTAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCAAGGCCAGAAAGGAGATTGCTTTCTCGGAAGCAGGTTGATTGTCAACCTTGGTCTATTCATACATACAAGGTTGATGATAAGATTGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCCCGGAAACAGCTGAAAGTCCAATATGAAGATGTCCAGGATGAAGATGGAAATGGAAATCTGGAGGAATGGGTCTCTGCTTTCAAGTGTGCTAGGCCTGATAAACTTGGGATGAGGCATTCTGGCAGGCCCACCATAAGACCTACTCCAACTCTTGAGGAACGAGAACTGGCTGTTGAGGTTGGACATGCAGTTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGGGTTGTAACTAGAATTGATCACTGTGGAGATGATAGTGTTCAAGTATACTTTCCTGGGGAATGCCTGTTGATGGAAGTTTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTGACATTAAGGCAAAACCTGAAATAACTACAACTTTATTCTTCACAGCTAATAATAATAGCTTTAACACAAAGCTTTCCGTGTCCCCATCAATGGACAAAGTTGGGGACACTGTTGGTTTTGGTAATTCATGTCATGATCCTTTAAGTAAGAAGTGTGATGAACTGGCTATTGAGGACCAGAAGCATGTGTCTTGTGAGGGCTTCACTGAAGATGGGGTCTGTGTCCTGGATAATAAACCCTCTTCTTCAGAAAAAAATACTGAAGCTGATAATATTGAGATACATGGTTGTTGTGATGAAGATAACACTGATGAGCATGACAGAGTTAACAATGATGATGATAGTATCAAGAATGGAGATAATAATGGTAATAATAAAGATATCAAGGTGTTTGAAACTTCTGGATCGGACTGTGAACCTGTAGAGCTCATGGAAGTGGCTGTATAA 2052 0.422 MAVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEICGKEGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSPGHNMVQAHETTNDSINGITGARLTDDKDFPMSNSKLSNSDIVWSGVAWRCGKQLKHFPAFWRNGIKIEIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNPHPREVFITPCSQVISAECVDGPATVLTREHYEKCMSFFTPTSRDRTHLCFRQFRSNKVKPFDLSKLRGYYAQPILSYLHLDSIQNPERLAGENEDLTACDDVKVGAKRSRSDKGSPQSWISQQGVRKLMRSKQMMVYKTFQVANYARPERRLLSRKQVDCQPWSIHTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYEDVQDEDGNGNLEEWVSAFKCARPDKLGMRHSGRPTIRPTPTLEERELAVEVGHAVDAWWSDGWWEGVVTRIDHCGDDSVQVYFPGECLLMEVCKKDLRISRDWLGDSWIDIKAKPEITTTLFFTANNNSFNTKLSVSPSMDKVGDTVGFGNSCHDPLSKKCDELAIEDQKHVSCEGFTEDGVCVLDNKPSSSEKNTEADNIEIHGCCDEDNTDEHDRVNNDDDSIKNGDNNGNNKDIKVFETSGSDCEPVELMEVAV* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0292 683 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 653 - -
Vra10g0292 683 SMART BAH_4 166 285 IPR001025 GO:0003682
Vra10g0292 683 PANTHER OS07G0607300 PROTEIN 4 653 - -
Vra10g0292 683 MobiDBLite consensus disorder prediction 635 650 - -
Vra10g0292 683 MobiDBLite consensus disorder prediction 635 663 - -
Vra10g0292 683 Gene3D - 134 287 IPR043151 -
Vra10g0292 683 Pfam Agenet domain 392 466 IPR008395 -
Vra10g0292 683 SMART agenet_At_2 387 452 IPR014002 -
Vra10g0292 683 SMART agenet_At_2 473 531 IPR014002 -
Vra10g0292 683 Pfam BAH domain 171 276 IPR001025 GO:0003682
Vra10g0292 683 ProSiteProfiles BAH domain profile. 166 285 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0292 Vra-Chr10 7486394 7492656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0292 401 529 PHD Transcription Factor Family AT5G58610 31.343 1.96e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0292 - - gmx:100306240 1139.79