Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0288 ATGGATCTTCAAACCTTCTACTTCATATCCATTCTCATTTTTATGTTTATTGCACACAAAATAATAACCAAGAAATCTGCCTCAACTCCAAATTTGCCACCAGGGCCGTGGAGGCTACCAATCATAGGGAACATACACAACCTCGTTGGCTCACTTCCCCATCGTAGACTGAGAGATTTATCAGCAAAATATGGACCCTTGATGCATCTGAAGCTTGGAGAGGTTTGTACTATTGTGGTTTCATCTGCAGAGTGTGCTAAAGAAGTGTTAAAAACCCATGATCTTATCTTTGCATCAAGGCCTCCAATACTAGCTTCAAAGATAATGTCTTATGATTCTATGGGGATTGCTTTTTCTCCTTATGGTGATTATTGGAGACAGCTAAGGAAGATTTGTGCGTTGGAGTTATTAAGCTCGAAACGTGTCCAATCTTTCCAGCCAATCAGAGAGGAAGAGCTCACTAAATTCATCAAAAGCATTGCTTCAAGAGAAGGGTCACCCATCAATCTCACCAAAGAAATCCTTACAACAATATCTACAATTGTTTCGAGGACAGCCCTTGGAAGCAAGTATAGGGACCATCAAAAGTTCATATCAGCTGTTAGGAAAGCCACAGAGGTCGCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCCGGATGGCTTCAGAACATCTCAGGGTTGAAGTCCAAGATTGAACAGTATCATCAACAAACTGATCAGATAATGCAAAGCATCGTGGATGATCACAGAGAAGCTAAATTAAGTGCTGCAAAATGCCAGGGTGAACAAGTGGAGGATGATCTTGTAGATGTGCTCATGAAGGAGGAGTTTGGCCTAAGTGACAATGGTATCAAGGCGGTGATTTTGGATATCTATGGAGGGGGAAGTGAGACATCAGCAACAACCATAGATTGGGCGATGGCTGAAATGATGAAGAATTCAAGAGTAATGAAAAAAGCACAAGCTGAAGTTAGAAAGGTATTCAACATGAAAGGAAGGGTTGATGAAAATTGCATCAATGAACTCAAATATTTGAAACTAGTTGTGAAAGAGACCTTGAGATTACACCCTCCAGTTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACATGTGAGATACATGGCTATAACATACCTGCCAAAAGCAAGGTCATAGTCAATGCTTGGGCAATCGGAAGAGATTCAAACTATTGGACTGAACCAGTGAGGTTTCATCCCGAGAGATTCATTGACAGCAGTATTGACTACAAAGGGAATAATTTTGAGTACATTCCTTTTGGAGCTGGAAGAAGGATATGCCCTGGAATCACATTTGCATCCAGAGTTATGGAACTGGCCCTTGCAATGTTGCTGTATCACTTTGATTGGAAACTTCCAAGTGGAATGATATGTGGAGAATTGGACATGAGTGAAGACTTTGGAATCACAATTAGAAGAAAGCATGATCAGCTCTTGGTTGCTTTTCCTTATCTTCCTTTGCCTGTCTCATGA 1497 0.4115 MDLQTFYFISILIFMFIAHKIITKKSASTPNLPPGPWRLPIIGNIHNLVGSLPHRRLRDLSAKYGPLMHLKLGEVCTIVVSSAECAKEVLKTHDLIFASRPPILASKIMSYDSMGIAFSPYGDYWRQLRKICALELLSSKRVQSFQPIREEELTKFIKSIASREGSPINLTKEILTTISTIVSRTALGSKYRDHQKFISAVRKATEVAGGFDLGDLYPSAGWLQNISGLKSKIEQYHQQTDQIMQSIVDDHREAKLSAAKCQGEQVEDDLVDVLMKEEFGLSDNGIKAVILDIYGGGSETSATTIDWAMAEMMKNSRVMKKAQAEVRKVFNMKGRVDENCINELKYLKLVVKETLRLHPPVPLLLPRECGQTCEIHGYNIPAKSKVIVNAWAIGRDSNYWTEPVRFHPERFIDSSIDYKGNNFEYIPFGAGRRICPGITFASRVMELALAMLLYHFDWKLPSGMICGELDMSEDFGITIRRKHDQLLVAFPYLPLPVS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0288 498 PANTHER CYTOCHROME P450 71B11-RELATED 6 491 - -
Vra10g0288 498 Pfam Cytochrome P450 33 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 Gene3D Cytochrome P450 25 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PANTHER CYTOCHROME P450 71D9 6 491 - -
Vra10g0288 498 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Vra10g0288 498 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0288 498 SUPERFAMILY Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0288 Vra-Chr10 7407134 7409159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0288 3 493 Cytochrome P450 AT3G26300 43.874 3.15e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0288 - K13267 gmx:100813216 752.281