Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0287 ATGAATGGAAAAGGGCCGTGGAGGCTACCAATCATAGGGAACATACACAACCTCGTTGGCTCACTTCCCCATCGTAGACTGAGAGATTTATCAGCAAAATATGGACCCTTGATGCATCTGAAGCTTGGAGAGGTTTGTACTATTGTGGTTTCATCTGCAGAGTGTGCTAAAGAAGTGTTAAAAACCCATGATCTTATCTTTGCATCAAGGCCTCCAATACTAGCTTCAAAGATAATGTCTTATGATTCTATGGGGATTGCTTTTTCTCCTTATGGTGATTATTGGAGACAGCTAAGGAAGATTTGTGCGTTGGAGTTATTAAGCTCGAAACGTGTCCAATCTTTCCAGCCAATCAGAGAGGAAGAGCTCACTAAATTCATCAAAAGCATTGCTTCAAGAGAAGGGTCACCCATCAATCTCACCAAAGAAATCCTTACAACAATATCTACAATTGTTTCGAGGACAGCCCTTGGAAGCAAGTATAGGGACCATCAAAAGTTCATATCAGCTGTTAGGAAAGCCACAGAGGTCGCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCCGGATGGCTTCAGAACATCTCAGGGTTGAAGTCCAAGATTGAACAGTATCATCAACAAACTGATCAGATAATGCAAAGCATCGTGGATGATCACAGAGAAGCTAAATTAAGTGCTGCAAAATGCCAGGGTGAACAAGTGGAGGATGATCTTGTAGATGTGCTCATGAAGGAGGAGTTTGGCCTAAGTGACAATGGTATCAAGGCGGTGATTTTGGATATCTATGGAGGGGGGAGTGAGACATCATCTACAACCATAACATGGGCAATGGCAGAGATTATAAAAGATGCAAGAGTAATGAAGAAGGTACAAGCTGAGGTAAGAGAAGTATTTGGTAAAGAAGGACAGGCTAATGAAAGTGACATGGAGAATCTAAAATATTTGAAATGTGTTGTGAAAGAGACATTGAGACTGCACCCTCCTGGTCCTCTTCTACTTCCAAGAGAGTGTGGAGAAGCTTGTGAGATAAAAGGGTATGACATACCAATGAAAAGCAAGATCATTATCAATGCTTGGGCCATTGGAAGAGACCCAAATCATTGGACTGAGGCAGAGAGGTTTTATCCTGAGAGGTTCATTGAAAGTGGTGTTGACTACAAAGGCAATAATTTTGAGTATATTCCATTTGGTGCTGGAAGAAGAATGTGCCCAGGCCTCACATTTGGCTTGACCACTGTTGAGTTTCCTCTTGCATTGTTAATCTATCATTTTGATTGGAAACTTCCCAATGGAATTAAGAATGAAGATTTGGATATGACTGAGGCCTTTGGAATATCCGTTGGTAGAAAATATGATTTGCAACTAATTCCTATCACTTTCCGTCCTTGA 1395 0.4143 MNGKGPWRLPIIGNIHNLVGSLPHRRLRDLSAKYGPLMHLKLGEVCTIVVSSAECAKEVLKTHDLIFASRPPILASKIMSYDSMGIAFSPYGDYWRQLRKICALELLSSKRVQSFQPIREEELTKFIKSIASREGSPINLTKEILTTISTIVSRTALGSKYRDHQKFISAVRKATEVAGGFDLGDLYPSAGWLQNISGLKSKIEQYHQQTDQIMQSIVDDHREAKLSAAKCQGEQVEDDLVDVLMKEEFGLSDNGIKAVILDIYGGGSETSSTTITWAMAEIIKDARVMKKVQAEVREVFGKEGQANESDMENLKYLKCVVKETLRLHPPGPLLLPRECGEACEIKGYDIPMKSKIIINAWAIGRDPNHWTEAERFYPERFIESGVDYKGNNFEYIPFGAGRRMCPGLTFGLTTVEFPLALLIYHFDWKLPNGIKNEDLDMTEAFGISVGRKYDLQLIPITFRP* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0287 464 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS P450 superfamily signature 396 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PANTHER CYTOCHROME P450 71D9 4 462 - -
Vra10g0287 464 PRINTS E-class P450 group I signature 31 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS E-class P450 group I signature 55 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS E-class P450 group I signature 147 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS E-class P450 group I signature 318 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS E-class P450 group I signature 359 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS E-class P450 group I signature 395 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PRINTS E-class P450 group I signature 405 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
Vra10g0287 464 SUPERFAMILY Cytochrome P450 5 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 Gene3D Cytochrome P450 3 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0287 464 PANTHER CYTOCHROME P450 71B11-RELATED 4 462 - -
Vra10g0287 464 Pfam Cytochrome P450 5 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0287 Vra-Chr10 7396045 7399332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0287 6 459 Cytochrome P450 AT3G26310 44.350 2.02e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0287 - K13267 gmx:100813216 762.296