Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0285 ATGGACATTGGTGTCGAAAACATTCCCTCACTTGCAATCTTACCTTTGTTCATCTTCTTGTTCACCATATTCTGGAGAACAAAAACCAAGTCTTCAAACTCCAAGTTACCACCAGGACCACCAAAACTACCCCTTATAGGAAACTTGCATCAGCTTGGAGCAATGCCTCATCATGGCCTGGCAAAACTTTCACACCACTATGGCCCTCTTATGCACATAAAACTCGGTGCACTTTCCACCATAGTGGTGTCTTCCCCTCAAATGGCCAAGGAAGTGATGAAGACGCATGACATCATTTTTGCAAATAGGCCTTATCTTCTTGCAGCAGATGTTATATCCTATGGCTCCAAGGGCATCAGTTTTTCTCCTTATGGCAGTTACTGGAGGCAGATGAGAAAAATTTGCACCTTTGAGCTACTAACTCCAAAGCGTGTTGAATCATTCAAAGCAATTAGAGAAGAGGAGGCTTCAAAGCTTGTTAAAGAGGTAGGTTTGAGAGAAGGGTCATCTACGAATGTCAGTAAGATGATCTATTCCTTCTCTTATGGATTGACATCAACTGTAGCTTTTGGAGGTAAATCCAAAGATCAAGAAGCTTTCATAGCTGTTATGAAAGATGTCTTAAAAGTTGTTGCTGGTTTCTCCCTGGCTGACTTGTATCCTATTAAAGTGCTTCCAGTTTTGACTGGATTAAGGTCCAGAGTTCAGAAGTTACATCAAGAAGTAGATAGGATCCTTGAGAATATTGTGAGAGATCATAGGGTCACTGGTTCTGAAACAAAGGAAACCAATGAAAAAGGAGAGGATCTTGTCGATGTCCTGCTAAAGCTTCAGAAGCAGAACAACCTTGAGCATCCTCTATCCGACAACGTTATCAAAGCAACCATTTTGGATATNNTCAGTGCTGGAAGTGGTACTTCAGCTAAAACCATAGAGTGGGCCATGTCAGAACTTGTGAAAAACCCAAGGGTGATGGAGAAAGCACAATCTGAGATAAGAAGGGTGTTTGGTGAAAAGGGGCATGTAGATGAAGCTAGCCTCCGTGAACTGAAGTACTTGAAGTCAATAATCAAAGAAACACTGCGACTACACCCTCCTGTTCCATTATTATTACCAAGAGAGTGCAGTGAGAGATGTGAAATCAGTGGGTATGAAATAGCAGCTAAGAGCAAGGTCATTGTTAATGTTTGGGCTATTGGAAGGGATCCAAAATATTGGAATGATGGTGAGAATTTTTGTCCAGAAAGGTTCCTTGATTGTTCAGTTGATTACAAAGGTGCAGATTTTCAGTTTATTCCATTTGGTGCTGGAAAGAGGATGTGCCCTGGAAGCACTTTTGGCATTGCTAATGTTGAACTCTTGCTAGCAAATTTACTTTTTCATTTTGATTGGAAGATGCCTGATGGGAATAAGCTTGAAGAGCTTGACATGACTGAATCATTTGGCTTGTCTGTTAGAAGAAAACATGATTTGTATTTGATTCCTTACACGTGCCACTCATTTGCTAATTACAACAATTGA 1521 0.4076 MDIGVENIPSLAILPLFIFLFTIFWRTKTKSSNSKLPPGPPKLPLIGNLHQLGAMPHHGLAKLSHHYGPLMHIKLGALSTIVVSSPQMAKEVMKTHDIIFANRPYLLAADVISYGSKGISFSPYGSYWRQMRKICTFELLTPKRVESFKAIREEEASKLVKEVGLREGSSTNVSKMIYSFSYGLTSTVAFGGKSKDQEAFIAVMKDVLKVVAGFSLADLYPIKVLPVLTGLRSRVQKLHQEVDRILENIVRDHRVTGSETKETNEKGEDLVDVLLKLQKQNNLEHPLSDNVIKATILDXXSAGSGTSAKTIEWAMSELVKNPRVMEKAQSEIRRVFGEKGHVDEASLRELKYLKSIIKETLRLHPPVPLLLPRECSERCEISGYEIAAKSKVIVNVWAIGRDPKYWNDGENFCPERFLDCSVDYKGADFQFIPFGAGKRMCPGSTFGIANVELLLANLLFHFDWKMPDGNKLEELDMTESFGLSVRRKHDLYLIPYTCHSFANYNN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0285 506 Coils Coil 228 248 - -
Vra10g0285 506 Gene3D Cytochrome P450 22 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 Pfam Cytochrome P450 37 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vra10g0285 506 SUPERFAMILY Cytochrome P450 37 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0285 506 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 499 - -
Vra10g0285 506 PANTHER CYTOCHROME P450 71B11-RELATED 10 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0285 Vra-Chr10 7352503 7354376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0285 7 495 Cytochrome P450 AT3G26300 41.283 1.26e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0285 - - gmx:100818000 835.099