Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0283 ATGGCTACAAGCACAACTAATGTGAATGACCTACCTCAGTGCAATGCAAATACTCCTGACCCTAATGAAACTTGTTTGGACAACGAGCCTAGGATTCATATGTGTTTTGATACAATGGAAGATGCAAAGAAATTTTACACGAATTACGCCATTACATGTGGATTTGCTGTGAGGACAAGAACTTCAAAAAAAGATAAGGACAACAATGTGTACTACTTGCGATTAGTTTGTTCAAGGGAAGGAAAATATGTATCTTCCATCAAACCTGAGGTGAAAACACTTCCAAGTCAAACAAATCAATGTCCAGCTGGCATTACCATTGCAAGGAAGGACAATAAATGGTTTATAAGGATAGTCGCGCTAGATCACAGCCATGACCTATGCCCGAATACATCTAAGCTAATTCCTGGGAATAGAAAATTAAGCATGCAAGTCAAACACACGTTGAAGGTCAATGACGATGCGGGAGTTGGAATAAATAAGAGTTTCCTTAGCATTGTTAGCGATGCAGGTGGATTTGAGAACATGGAATTCGTGGAACGAGATGCACGAAACTGCATTGTGCAACACAGAAGATCTTTATGTAAGGACGATGATGGTCAAGCCCTCTTACGACACTTCTCATCAATGAAAGATTTAAACAATGACTTCTTCTATGACATTGCATTGGACGAAGGAAATAGAATATGTAGTGTGTTTTGGGCAGATGTAAGAAGTAGAGCTGCGTGTGAAGAATTTGGTGATGTTGTGTCATTCGACACCACTTACTTGACAAATAAGTATGGCATGCCAATTGCGTCGTTTGTAGGAGTTAACCATCATCGTCACTCCATTTTACTTGGATATGGATTGCTTTCTTTCGAAGACACTGCGTCATTTGTGTGGTTGTTTGAATCTTGGTTGAGATGCATGGGAAATAAGGCCCCTGATGGCATTATAACGGATCAATGCAGGGCAATGGCGAATGCCATTGAAGAGGATTTTCCAAATACAAGACACGGGTGGTGTTTATGGCACATAATGAAGAAGTTGCCCGAAATATTTCAAGGCTTCAAAAATTATGTTGCCATCAAAACAAATATACATGTATTTGTCTATGACTGTGGGTCACCAACGGACTTTGAGAATGGATGGGAAGAACTAGTAACGAAGCATGCATTAGAGGGGAATGATTAA 1176 0.3997 MATSTTNVNDLPQCNANTPDPNETCLDNEPRIHMCFDTMEDAKKFYTNYAITCGFAVRTRTSKKDKDNNVYYLRLVCSREGKYVSSIKPEVKTLPSQTNQCPAGITIARKDNKWFIRIVALDHSHDLCPNTSKLIPGNRKLSMQVKHTLKVNDDAGVGINKSFLSIVSDAGGFENMEFVERDARNCIVQHRRSLCKDDDGQALLRHFSSMKDLNNDFFYDIALDEGNRICSVFWADVRSRAACEEFGDVVSFDTTYLTNKYGMPIASFVGVNHHRHSILLGYGLLSFEDTASFVWLFESWLRCMGNKAPDGIITDQCRAMANAIEEDFPNTRHGWCLWHIMKKLPEIFQGFKNYVAIKTNIHVFVYDCGSPTDFENGWEELVTKHALEGND* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0283 391 Pfam FAR1 DNA-binding domain 44 128 IPR004330 -
Vra10g0283 391 Pfam MULE transposase domain 249 343 IPR018289 -
Vra10g0283 391 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 391 IPR031052 GO:0006355
Vra10g0283 391 PANTHER OS03G0843700 PROTEIN 26 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0283 Vra-Chr10 7325770 7326945 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra10g0283 MULE 1.3e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0283 - - vra:106753602 665.996