Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0264 ACAAAACTGGAAGAAACTTCAATGCCCTTTGCTCGTCGGTATTTGCCACCAAAACCTTTTGAAGCTTTAAAAATGATGAGAGATTTCTCAAAAGAAGTTGCAGAGATTACAGATGAACATGGAAGCTTGCTAGATTTCCTCGATGATGCAGATAAACTGGCTGATGCTGAAGAAGATGTCAAAAGGCGTGATAGAATGAAGGAAAGGTTGATGAGGCTGAGAGAAGCAGCTTTTCGCATGGAAGATGTGATTGATGAATATTGCATCCGTGTTAAAGAGAAACAACCTCAACATGGTCCTCGATGGGCAGCTTCACTCTCTAAGACTGTCCACAGCATCAAAACCTTCATCCTTCGACTTCAAATAGCGTGTAAGATTCAGGATGAAAAATCAGTTGTTCGTGATGAAAAAGTTGGTTTTGAAAGCCAATATTTTTCAGAAAAAATACTAAACAGTTCTAGAGAAAACAAAAATGTCACGTTTAATCAACTTCGAATGGATCCTCTCTTTATGAAGGAAGAGGAGGTTGTTGGACTTGCTGGACCTACAGAGAGATTGACAGATTGGTTAACAAATGGACGAGAAGAACGCACTGTGATTTCTGTTGTGGGTATTGCAGGAGTTGGAAAAACCACTCTTGCCAAGCATGTTTTTGACAAGGTCCATGACGACTTTGAGTGCCATGCATTGATCACAGTCTCTCAATCCTACACTGTAGAAGAATTATTGAGGAAAATGGTACGCAAACTTTGCAAAGAAAGAAAGGAAGATCCACCTTGTAAAATTTCTACGATGGATAGAGGCTCCTTGATTGAAGAAGTCAGAGATCGCTTGCACCAGAAGAGGTATGTTGTCTTATTTGATGACGTATGGAATGAAAAGTTTTGGGATGACATTCAATCTGCTCTGATTGATGATAATAACAAAAGTAGGATAATAATGACTACAAGGCACGAGAAGGTTGCGATCTTCTGTAAGAAATCTTCTTTTGTTGAAGTGCATAAACTAGAAGAGCCCTTAAAAGATGAATCTTTCAGATTGTTCTGTAGAAAGGCATTTAAATATGGTTCTGCCGGAGGCTGCCCAGAAGAACTCAAAGACATATCTCTTGAAATTGTTAGGAAATGCAAAGGTTTACCTCTGGCAATGGTGGCCATTGGTGGCTTCTTGTCCCAAAAAGATGAAAGTGCAAAAGAATGGAGACTGTTTAGTCAAAATCTAAGTTCAGAGTTGAAGAGGAATCCTGACTTAAATATTATAACAAAAATTATAGGTTTAAGTTATGATAATTTGCCGAGCCCTCTCAGGTTATGTTTATTGTATTTCGGAATGTATCCAAAAGATTATGAAATTGAATCTGAGAGACTGGTTAGGCAATGGGTGGCTGAAGGATTTGTTACCCATGAAGACGGAAAAACTTTAGAAGAAGTTGCACATGAATATTTATTAGGGTTGGTCCGTAGAAGTTTGGTGCAAGTGTCATCATTTTCCATGGAAGGAAAAGTGAAAAAATGTTGTGTTCATGACTTAATACACGATATGATCCGTACAAAAGTGAAAGATACATGTTTTGGAGAGTATATTGGCGGAGGGCATGATCAATCCGAGTCAAGTGAGTTGGTTCGACGTTTGACAATTCAAGCCAACAATGATTTAAATAGACGTATTAAAAGATCACACATTCGGTCAATTATAGTCATTCCAGGAAAAAAAGAAGAACTATTGTCTGTCCACTTGGTAAGAAAAATTCCTACAGATTATATGCTATTGAAGGTACTTGATTTTGAGGGTTGTGGATTACTTTGTGTTCCTAAAAAGTTGGAGAATTTAATCTATCTGAGGTATTTAAGCTTTAGGGGGACGCAGATAAAAGTTCTTCCAAAATCCATTGGTAAGCTCGTGAACTTGGAGACCTTGGATATACAACAAACGCAAGTGTGTAAGGTGCCGAAGGAGATCACAAAGCTTAGAAAGTTACGGCATCTTCTGACACCTGACTCTGTGTCTTCTTCAATTGAATGGAAGGATATTGGAGGCATGACAATGCTGCAAAAGATACCACAAGTGCGCATGGAGGATGATGGAGTGGCCATTAGAGAGGTAGGGAAGTTAAAGCAGTTAAGAAATCTGAGGGTGCTTTGTTTCAGCGGAGAGCACATTACTTTACTTTTCTCCTCAATCAATGAGATGGAACACTTGCAGGCACTACGCATTGAAAAATCTGGTGATCGCAGCGTAGTTGACTTGAACACTACGTCACCTATGTTTCCTAGGTCAAGACTTAGGAAGCTTTTCCTTGATATAAAGTTAGAAAAGTTACCAAATTGGATTCCCCAACTCCATGATCTTGAGAGATTGATCTTGCGCCACTCTGACTTAACCAATGATCCCTTGGAATCACTAAAAGATATGCCTAGTTTGTTGGTTCTCTCTTTATCCCACGCTTATGAAGGTCAAACTTTGCATTTTAAATCTGGAGGGTTCAAGAAACTAAGAAAGCTAAATCTGGAACATCTTTGGAACTTGAATTCGATCCTTATTGATGAGACAGCTCTGCAGTCTTTGGAACATCTTAATTTGAAAGGCCTTGATGAACTCAGAACTGTCCCCGATGGAATTCAACATCTGAAGAAACTTAAATTTCTTCTTGTCCCTTCTATGCCAACTCAATTTGTTAAGGAAATCGATCGCATTGGTAAAAACCAGCACTGGGACATCAATTATGGCTATATGTGA 2736 0.3885 TKLEETSMPFARRYLPPKPFEALKMMRDFSKEVAEITDEHGSLLDFLDDADKLADAEEDVKRRDRMKERLMRLREAAFRMEDVIDEYCIRVKEKQPQHGPRWAASLSKTVHSIKTFILRLQIACKIQDEKSVVRDEKVGFESQYFSEKILNSSRENKNVTFNQLRMDPLFMKEEEVVGLAGPTERLTDWLTNGREERTVISVVGIAGVGKTTLAKHVFDKVHDDFECHALITVSQSYTVEELLRKMVRKLCKERKEDPPCKISTMDRGSLIEEVRDRLHQKRYVVLFDDVWNEKFWDDIQSALIDDNNKSRIIMTTRHEKVAIFCKKSSFVEVHKLEEPLKDESFRLFCRKAFKYGSAGGCPEELKDISLEIVRKCKGLPLAMVAIGGFLSQKDESAKEWRLFSQNLSSELKRNPDLNIITKIIGLSYDNLPSPLRLCLLYFGMYPKDYEIESERLVRQWVAEGFVTHEDGKTLEEVAHEYLLGLVRRSLVQVSSFSMEGKVKKCCVHDLIHDMIRTKVKDTCFGEYIGGGHDQSESSELVRRLTIQANNDLNRRIKRSHIRSIIVIPGKKEELLSVHLVRKIPTDYMLLKVLDFEGCGLLCVPKKLENLIYLRYLSFRGTQIKVLPKSIGKLVNLETLDIQQTQVCKVPKEITKLRKLRHLLTPDSVSSSIEWKDIGGMTMLQKIPQVRMEDDGVAIREVGKLKQLRNLRVLCFSGEHITLLFSSINEMEHLQALRIEKSGDRSVVDLNTTSPMFPRSRLRKLFLDIKLEKLPNWIPQLHDLERLILRHSDLTNDPLESLKDMPSLLVLSLSHAYEGQTLHFKSGGFKKLRKLNLEHLWNLNSILIDETALQSLEHLNLKGLDELRTVPDGIQHLKKLKFLLVPSMPTQFVKEIDRIGKNQHWDINYGYM* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0264 911 PRINTS Disease resistance protein signature 199 214 - -
Vra10g0264 911 PRINTS Disease resistance protein signature 277 291 - -
Vra10g0264 911 PRINTS Disease resistance protein signature 376 390 - -
Vra10g0264 911 PRINTS Disease resistance protein signature 850 866 - -
Vra10g0264 911 Pfam Rx N-terminal domain 24 101 IPR041118 -
Vra10g0264 911 Gene3D - 428 519 IPR036388 -
Vra10g0264 911 Coils Coil 56 76 - -
Vra10g0264 911 PANTHER - 50 884 - -
Vra10g0264 911 Gene3D - 19 123 - -
Vra10g0264 911 Gene3D - 340 427 IPR042197 -
Vra10g0264 911 Gene3D Ribonuclease Inhibitor 542 690 IPR032675 -
Vra10g0264 911 SUPERFAMILY L domain-like 507 891 - -
Vra10g0264 911 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 442 IPR027417 -
Vra10g0264 911 Gene3D Ribonuclease Inhibitor 697 902 IPR032675 -
Vra10g0264 911 PANTHER DISEASE RESISTANCE PROTEIN RP 50 884 IPR044974 GO:0006952
Vra10g0264 911 Pfam NB-ARC domain 183 430 IPR002182 GO:0043531
Vra10g0264 911 Gene3D - 163 333 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0264 Vra-Chr10 6981602 6985023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0264 200 888 WRKY Transcription Factor Family AT5G45050 24.066 1.78e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0264 K13457 - gmx:121174068 1019.22