Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0260 ATGGCAGAAACTGCAGTGTCTTTTGCGAGTAAGCATGTGCTTCCAAAATTTTTGGAAGCTGTAAAGATGCTGAGAGATCTACCAAAAGAAGTAGCAGAAGTTGCAGATGAACTAGAAAGCTTTCAAGATTTCATCCATGATGCAGATAAAGTGGCAGAAGCTGAAGAGGATAAAAATAGGCGTGATAGAATAAGAAAAAGGTTGATGAAGCTGAGAGAAGCAGCTTTTCGCATGGAAGATGTAATCGATGACTATGTGATATGTGACGAAAAACAACCTGAAGAAGATCCTCGATGTGCAACTTTACTCTGTGAAACTGTTGAAATCATCAAAACTCAAATCCTTCGCCTGCAAATAGCGTATCAGATTCAGGATGTTAAGTCACTTGTTCGTGCCGAAAGAGATAGCTTCAAAAACCATTTTCCTATAGGACCAAGATCAGACGGTTCTAGAAGAAATGAAAACTTCACATGGCAGAAACTTCGAATCGATCCTCTGTTTATTAAGGAAGACGAGGTTGTTGGATTTGAAGGCCCTATACATACATTGAAAAAATGGTTGACAGAGGGAAGAAAAGAACGCACTGTCATCTCTATTGTAGGAATGGCAGGATTGGGAAAAACCACTCTTTCTAAGCAAGTTTTTGACAGGGTACATACAGACTTTGAGTGCCATGCGTTGATTACAGTGTCTAGATCCTACACTGTTGAAGAGTTGCTGAGGGATATGACGAACAAGCTTTGCAAAGAAAGAATGGAGGATCCTCCTCGGGATGTTGCAACTATGAATCAAATGTCGTTGATAGAAGAAGTCAGAAACCGTTTGTGCAATAAGAGGTATGTTGTCTTGTTTGATGATGTATGGAATGAAACATTTTGGGATGACATTGAATTGGCTCTGATTGATAATAAAAATGGAAGTAGGATATTAATCACTACCCGGGATGAGAAGGTTGTGAATTTCTGTAAAAAAGCTTTATTTTTTGAGGTGCATAAGTTACAACCTTTGAGTAAAGCAAAATCATTGGAGTTGTTATGTAAGAAGGCGTTTGGGTATGGTTTTGATGGATGTTGTCCAAAAGATTATGAAGAAGCAGGTCTGGACATTATTAGGAAGTGTGAATGTTTACCTTTAGCAATTGTGGCAATTGGTAGTCTTTTATATAGAAAATGTAAAAGTTCATCTGAATGGCACCTTTTTAGTCAAAATCTAAGTTTGGAGTTGCAGAGCAATTCCGAGTTACACAGTGTAACAAAAATTTTAAGTTTGAGTTACGATGATTTGCCACATAATCTCAGGTCATGTTTGTTATATTTTGGAATGTATCCTGAAGATTACGAAGTTAAATGTGGTAGAATAATTAAGCAGTGGATAGCTGAAGGGTTTGTGAAACATGAAAGTGGAAGAAATCTAGAAGAAGTGGCACAACAACATTTAATGGAGTTGATCAGTCGAAGCCTAGTACTAGTAGCATCATTTACTACAGATGACAAAGCTAAAACATGTCGTGTTCATGACTCAATACATGAAATGATTCGTGGAAAAATTAAGAATACAGGGTTTTGTGAGTATATTGATGAGCATAATCATTTGGAGTCAAGTGGTATCATTCGACGCTTAACAATAGCAAGAAATTCCAATGGTTTAAGTGGATCCATAGAAGAATCACAAAATATTCGGTCAATTCTAATTTTTACAAATGAAGTGTCATCTGAAGACTTCACCAGACGCTTGCTTGCAAAATACATGCGGTTGAGGGTGCTCGATTTTGGATATGCTCCATTACATGATGTTCCTGAAGATTTGGGGAGTTTAATCCACTTAAAGTATTTAAGCTTCCGCGGTACATTCATAAGTGGCCTTCCAAAATCCATCAGTAAGCTCCAGAACTTAGAAACTCTAGATGTACGAGCATTTGGGGAGATTGAGGTACCAAAGGAGATTACCAAGCTGAGAAAGCTACGTTATCTATTGGGTAACCCAATATCTTCCATTGCAGTGAAGGATAGTCTTGGGAGCATAACATCTCTGGAAAAGATGCATGTATTGATAATAGATCCAGATGGAGTAGTTATTAGGGAGCTTGGAAAGCTAAAGCAATTAAGGGATCTGAGGCTTACCATGCTTAGGGGAGATCAAGCTGATACTCTTTGTTCCTCAATAAACGAGATGCCACTCTTGGAGCGACTACATATCTCTTTAAAATATGGGACTGAAACAATTGACTTGCACATTAGGTTATCCTTGTCTAAACTAAGGAAGCTTCGCCTATATGGCAGTTTAAAAGAGTTACCAAATTGGATTCCGCGACTCCAAAATCTTGTGAAATTGTCTTTGGTTGAATCCAGGTTAACTAACATTCGATTGGCAGATCTTGGAAGTATGCCAAATTTGTTGTTGCTCTCTTTTGACTCTAATTCTTATGATGGAGAAACTTTACATTTTGAAAATGGAGGATTTCAGAAATTAAAGGAACTACATCTCAATGGTTTGCAGCAATTGAGCTCCATCTTTATTGATAGCGGAGCACTGCAATCTTTGGAAAAGCTTCAGATAATGAGTATTCTCCAACTGAAGGCAGTACCCTGTGGCATTCAACACTTAAAGAAACTCCAAGTTCTCGACATCTTATATATGCCGACCGAATTTCAACAAAGGATTGACCCCAACGGAGGAAAAGAGCATTGGATGATCAAACATGTGCCCGATGTACATTTTGTCACGAAAAATCGTGCTTTGCTATTGGCTGAGAGAGCAGCTGAAATTTTTTCTTCGCGGTTATAG 2784 0.3815 MAETAVSFASKHVLPKFLEAVKMLRDLPKEVAEVADELESFQDFIHDADKVAEAEEDKNRRDRIRKRLMKLREAAFRMEDVIDDYVICDEKQPEEDPRCATLLCETVEIIKTQILRLQIAYQIQDVKSLVRAERDSFKNHFPIGPRSDGSRRNENFTWQKLRIDPLFIKEDEVVGFEGPIHTLKKWLTEGRKERTVISIVGMAGLGKTTLSKQVFDRVHTDFECHALITVSRSYTVEELLRDMTNKLCKERMEDPPRDVATMNQMSLIEEVRNRLCNKRYVVLFDDVWNETFWDDIELALIDNKNGSRILITTRDEKVVNFCKKALFFEVHKLQPLSKAKSLELLCKKAFGYGFDGCCPKDYEEAGLDIIRKCECLPLAIVAIGSLLYRKCKSSSEWHLFSQNLSLELQSNSELHSVTKILSLSYDDLPHNLRSCLLYFGMYPEDYEVKCGRIIKQWIAEGFVKHESGRNLEEVAQQHLMELISRSLVLVASFTTDDKAKTCRVHDSIHEMIRGKIKNTGFCEYIDEHNHLESSGIIRRLTIARNSNGLSGSIEESQNIRSILIFTNEVSSEDFTRRLLAKYMRLRVLDFGYAPLHDVPEDLGSLIHLKYLSFRGTFISGLPKSISKLQNLETLDVRAFGEIEVPKEITKLRKLRYLLGNPISSIAVKDSLGSITSLEKMHVLIIDPDGVVIRELGKLKQLRDLRLTMLRGDQADTLCSSINEMPLLERLHISLKYGTETIDLHIRLSLSKLRKLRLYGSLKELPNWIPRLQNLVKLSLVESRLTNIRLADLGSMPNLLLLSFDSNSYDGETLHFENGGFQKLKELHLNGLQQLSSIFIDSGALQSLEKLQIMSILQLKAVPCGIQHLKKLQVLDILYMPTEFQQRIDPNGGKEHWMIKHVPDVHFVTKNRALLLAERAAEIFSSRL* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0260 927 PANTHER DISEASE RESISTANCE PROTEIN RP 29 876 IPR044974 GO:0006952
Vra10g0260 927 Pfam NB-ARC domain 179 427 IPR002182 GO:0043531
Vra10g0260 927 Gene3D - 4 120 - -
Vra10g0260 927 PRINTS Disease resistance protein signature 196 211 - -
Vra10g0260 927 PRINTS Disease resistance protein signature 274 288 - -
Vra10g0260 927 PRINTS Disease resistance protein signature 373 387 - -
Vra10g0260 927 PRINTS Disease resistance protein signature 626 642 - -
Vra10g0260 927 Gene3D - 335 424 IPR042197 -
Vra10g0260 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 439 IPR027417 -
Vra10g0260 927 Gene3D - 425 515 IPR036388 -
Vra10g0260 927 SUPERFAMILY L domain-like 503 883 - -
Vra10g0260 927 PANTHER - 29 876 - -
Vra10g0260 927 CDD RX-CC_like 2 128 IPR038005 -
Vra10g0260 927 Gene3D - 165 327 IPR027417 -
Vra10g0260 927 Coils Coil 54 74 - -
Vra10g0260 927 Gene3D Ribonuclease Inhibitor 542 890 IPR032675 -
Vra10g0260 927 Pfam Rx N-terminal domain 5 94 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0260 Vra-Chr10 6939211 6943556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0260 172 390 WRKY Transcription Factor Family AT5G45050 26.027 7.32e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0260 K13457 - gmx:100806153 1070.84