Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0240 ATGGGTTTCCTGGTGACGACGCTGATCTTCGCAGTGATCGGAATCATCGCGAGCCTCTGCACCAGAATTTGCTGCAACAGAGGACCTTCTACCAATCTATTTCACCTAACTTTGGTAATTACTGCAACGATTTGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAAACCACTCATTGTACCTATACTGAGTGAGGGCGAATGA 213 0.4695 MGFLVTTLIFAVIGIIASLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKPLIVPILSEGE* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0240 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Vra10g0240 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 70 IPR008389 GO:0033179|GO:0046961|GO:1902600
Vra10g0240 70 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0240 Vra-Chr10 6717505 6720168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0240 1 70 Primary Pumps ATPases(2) AT5G55290 87.143 1.44e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0240 K02153 - jre:108984713 144.436