Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0223 ATGATGATGTTTGAGGAGATGGGGTTTTGTAATGATTTGGACACGATGTCTATTGTCCTCGGGGACGAGGATATCAGCGCCCGACAAACTGATCCAGAGGCGATAGTTGAGGATGATTTCAATGATGAAGAAATTGGGGTAGATGAGCTTGAAAGGAGGATGTGGAAGGACAAGATGCGTCTCAAGCGATTGAAGGAGCATAGTAAATCTAAGGAAGGAATTGATGCGGTGAAGCAAAGACAATCTCAAGAACAGGCAAGGAGGAAAAAGATGTCCAGGGCTCAAGATGGAATGTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGGAAACCAGTGACAGGAGCATCTGATAATCTTCTTGAATGGTGGAAGGATAAGGTCAGATTCGATCGAAATGGTCCAACTGCCATAGCCAAATACCAAGCTGATCATTCTATACCTTGCAAGTGCGGAGACCCACCTCCGATTTTGGTTAGAGAGAGAGGTGAGAAGGAGAGAATCTGGAACCCTAATTACATATGA 564 0.4468 MMMFEEMGFCNDLDTMSIVLGDEDISARQTDPEAIVEDDFNDEEIGVDELERRMWKDKMRLKRLKEHSKSKEGIDAVKQRQSQEQARRKKMSRAQDGMLKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLLEWWKDKVRFDRNGPTAIAKYQADHSIPCKCGDPPPILVRERGEKERIWNPNYI* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0223 187 Coils Coil 47 67 - -
Vra10g0223 187 Pfam Ethylene insensitive 3 48 162 IPR006957 GO:0005634
Vra10g0223 187 Gene3D - 80 163 IPR023278 GO:0003700|GO:0005634
Vra10g0223 187 MobiDBLite consensus disorder prediction 64 91 - -
Vra10g0223 187 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 163 - -
Vra10g0223 187 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 163 IPR006957 GO:0005634
Vra10g0223 187 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0223 Vra-Chr10 6298880 6299535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0223 2 161 EIL Transcription Factor Family AT3G20770 75.926 1.41e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vra10g0223 EIN3 1.2e-54 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0223 K14514 - gmx:100818629 295.049