Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0201 ATGTCGACAGTGCATCATTACTACAGTGTGATGAGGGTGAATGATGAACACACCACAGTTCTGCCGGGTGATTATTTCAACTTCGAAGTCAAAGTTAGATTCCACTCAGCGGATACATTCCCAGCGGGATTACAGCATCATTTTTCTCCAGCATCAATACCCGCCCAAGATTTCTTCCAACAGGGTCCAACCTTCTTACACACAGTGTTGTCACTTTCACCCTTCACAATAGAATGTGTGGATGAAATAGCAGAAGGGGTTCTTTCTAATGTTCAAGCCTTGTTTCGAGTTGATAGCGTTTCTTCTTTTATTTCTCTGGAACCCCAGGAATCTCAACACCGAGTCATCCCGTTAACTGTGACTGTTATAATATTGAACTTTGTTGCAGCTAGTGAAGAGTTCACGCAGAGGTCTAGAAGGAGTCAGAGGGTGAGTTTAAGAAGGAGTCCGAGGCTGGGTACAAGAAGGAGTGAGAGACTGAGTTCGAGAACGAGTCAGAGGCAAAGTTCTAGACTGAATCAGAGGCAGAGTTCTGAAGTGAATTATGGTTCCGATGATGAAATCCTAATAAATAGATTTTTGAAGTGTACTGTTATTAGAGAATGTGAAGATTGTTGTATCTGCTTGGAAGAGATGAACGTGAATGCTGAGGGCTACACGTTGCCATGCCAACATCTCTTTCATCTTCCATGTATTCTCACATGGCTCAAAACCAGTCATGTATGTCCTTTGTGTCGTCACACTTTGCCAACAGGATAA 759 0.4295 MSTVHHYYSVMRVNDEHTTVLPGDYFNFEVKVRFHSADTFPAGLQHHFSPASIPAQDFFQQGPTFLHTVLSLSPFTIECVDEIAEGVLSNVQALFRVDSVSSFISLEPQESQHRVIPLTVTVIILNFVAASEEFTQRSRRSQRVSLRRSPRLGTRRSERLSSRTSQRQSSRLNQRQSSEVNYGSDDEILINRFLKCTVIRECEDCCICLEEMNVNAEGYTLPCQHLFHLPCILTWLKTSHVCPLCRHTLPTG* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0201 252 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 138 249 - -
Vra10g0201 252 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 138 249 - -
Vra10g0201 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 251 IPR013083 -
Vra10g0201 252 ProSiteProfiles Zinc finger RING-type profile. 205 246 IPR001841 -
Vra10g0201 252 SMART ring_2 205 245 IPR001841 -
Vra10g0201 252 SUPERFAMILY RING/U-box 204 250 - -
Vra10g0201 252 MobiDBLite consensus disorder prediction 163 179 - -
Vra10g0201 252 Pfam Ring finger domain 204 246 IPR001841 -
Vra10g0201 252 MobiDBLite consensus disorder prediction 140 179 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0201 203 250 C3H Transcription Factor Family AT1G18760 56.250 1.29e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0201 - K22378 var:108320046 431.795