Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0186 ATGAGTTTCCCAAAAAGCCCTCGCCATTCTTCTCCTTATTCTCCCTCCTCCCCTTCCTCTTCTTCCTACATTCCACCCCACCGTACCCAGCTGCACCCTCGCATGATCTCCCTCTATACTTCTTCTTCTCCTTCTTCCAGTCACACAAATCCAAATCCCAACAAGCCCCACACCGGAAAATGCCTTCTCTTCCTCTTCGCCTTCCTCTTCTTCACTGCTCCATTCCTCTTCTACCTCTTTTCCACCGCCCTCCAAATCCACTCCTCCCCCAAATTCGGCGATTCTCGCCCTGTCTCCTTCGCCCTCGCTTTCCGCGCCGGCCCCGACGCTCTCCGCCTCTCCGTTTACCACTTTCTTGGCCCCGGCCTCGGCCTCCTCGCCGCCGCTCACTCCGCCGCCGCCGCTCCCGGCTATGCTGCCCCGCCCGACGCGCTCCGTGGCGCCGTCGCTGAGCTTGTCCGGTTCGCTAAGGGCAAGGTGCCTCGCCGGGAGTGGGGGAACACCGTCGTGCGGCTTGCGGCCTCCGAGGAGCTCGAGCAGCTCGGCTCCGAGGAAGCAGAGAAGGTTCTGGAATGTTGCAGAAAGGCCTTAAAGGCGTCCGGGTTCTTGTTCAAGGATGAATGGGCACGCGTCGTTTCAGGAGAAGAACAAGGCATCTCTTCTTGGGTTGCAGTAAATTATGCTCTTGGAAATTTGGGACGCGAGCCTCACGAAACAACTGGAATAGTTGAACTTGGTGGGGGTTCTTTGCAGGATGTAGTCTGGAAATCATTAGAGGAGAGACTGAAATACAGAGAATTGAAGCTTTATAAATGCCTTCACTCACCATGTAAAATCACTTCATCGTTCCCCGAATTATTAGGCGAGCAAGATTCAAAAAGCTTCTTGTATACTTCTGAGATTCTTAGGATGGCTCCTAGGACTTTGTTTCAATTAGAGGAAGCAGGCCGACATTACTGTGAAGATCATTGGGATGCTCTCAAAGATCAACATAATGAAATTGATTATCTGGATTTATTGCAGTATTGTTTCTCTTCTGCCTATATGCTGGCTCTATTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGAACGAGAAGATTAACAGTCACGTAGATTGGACACTCGGATCCTTCATAATTGAAACAATGGGAGAACCCCTTGAATTGGAACATATAGATACGGGGATGATACTAGGGAATGAATCAGTCACATATTTTTCATTATTTGCATTTCTTTTCTTAATCATACTTGCTGCATTCTTTGTTATGCAATGGAGAAAGCCACAATTGAAGACGGTATATGACCTTGAGAAGGGACACTATATTGTTACAAGAATACGCAGATCACAGCCCCAGCTATGCACAGAAAGGACCATTGTCTGGAATATGTGGGAGCTAGCTCATTGA 1425 0.4919 MSFPKSPRHSSPYSPSSPSSSSYIPPHRTQLHPRMISLYTSSSPSSSHTNPNPNKPHTGKCLLFLFAFLFFTAPFLFYLFSTALQIHSSPKFGDSRPVSFALAFRAGPDALRLSVYHFLGPGLGLLAAAHSAAAAPGYAAPPDALRGAVAELVRFAKGKVPRREWGNTVVRLAASEELEQLGSEEAEKVLECCRKALKASGFLFKDEWARVVSGEEQGISSWVAVNYALGNLGREPHETTGIVELGGGSLQDVVWKSLEERLKYRELKLYKCLHSPCKITSSFPELLGEQDSKSFLYTSEILRMAPRTLFQLEEAGRHYCEDHWDALKDQHNEIDYLDLLQYCFSSAYMLALLHDVLGIAMEEKRVGFGNEKINSHVDWTLGSFIIETMGEPLELEHIDTGMILGNESVTYFSLFAFLFLIILAAFFVMQWRKPQLKTVYDLEKGHYIVTRIRRSQPQLCTERTIVWNMWELAH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0186 474 MobiDBLite consensus disorder prediction 1 25 - -
Vra10g0186 474 Gene3D Exopolyphosphatase. Domain 2 256 372 - -
Vra10g0186 474 Pfam GDA1/CD39 (nucleoside phosphatase) family 135 251 IPR000407 GO:0016787
Vra10g0186 474 Pfam GDA1/CD39 (nucleoside phosphatase) family 296 390 IPR000407 GO:0016787
Vra10g0186 474 Gene3D - 98 235 - -
Vra10g0186 474 PANTHER APYRASE 6-RELATED 20 259 - -
Vra10g0186 474 PANTHER APYRASE 6-RELATED 270 450 - -
Vra10g0186 474 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 20 259 IPR000407 GO:0016787
Vra10g0186 474 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 270 450 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0186 Vra-Chr10 5215650 5244328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0186 97 251 Calmodulin-binding Proteins AT3G04080 33.742 1.28e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0186 K01510 - gmx:100806446 606.675