Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0155 ATGGCATACGCTGTGTTCTTGAACGCTTCTTTCCTCCTTGTGATGTGTTCTTTTATGATTATTCATTTCCACACCCCGCAAACAGAAGTTGTGGTTGTGACCAAAATTTCTGCCTTTGGTAGCAGCAATGAGCAAGAATGTGAGAGCTTAGCCAGCCTAGATGATTTCAAAGCCAAGTGCCTGTACCTGAAATCCAATGATCCTTGTGCTCCTCAGGGCTATATTGATTATCTATACCTTTTCTATTGCCAAATTGGGAGTTACCCTTCATTAGGTTACACCCTTTTATTTCTTTGGCTCCTAATTCTGTTTTACTTATTGGCTAATACAACTTCTCAATACTTTTGTCCCTCCCTTGAAAGCATGTCCAAATTACTAAGGTTGTCCCCCACAATTGCGGGAGTCACCCTCCTCTCACTTGGCAATGGTGCCTGTGACGTTTTCTCTAGCCTTGTCTCTTTCCAGGGAAGTGGGACACGCAGCATTGGTTTTAACACGGTTCTTGGGGGTGTTTCTTTTGTGTCCTGTGTTGTGGTGGGGACTGTGAGTATCGCAGTACGTCAAAAGAGGGTTCAAATTGATAAGTCCGCGTTTCTGAGAGATGTTTATTCTCTCCTTTTAGTTCTTTTTACCTTGTTTGGTATTTTGATCTTTGGCAAGATCAATGTTCTTGGAGCAGTTGCTTTTACTATGATGTATGCTGTGTATGTAGCTATTGCTTATGTTTCTTCTACCAGATGTGATCAAGGTGGTGATGCTGCTGAGACGGGTGGTGTTGGTTGCGGCAATGGTTTGAATTTGCCTCTTCTCGTTGGTGTGAAGAAAGAAGCAATTGATTGTGAGGAAAATGGTGGTGAAGAATATGGATTGAATGAGGAGAAGTATTGTTGTTGTATGAGATATTTAATGTGTAAAGTGCCACTTTATGTTCTGGAGATGCCCCTTTACATGCCTAGGAGATTGACAATACCTGTTGTGAGTGAAGAGAGATGGTCAAAGGTGTATGCAGTTTTTTCTGTTATACTAGCACCACTTCTCATGTCTTTCCTGTGGAGTAGTACTTATAATGGAAACAGTTTCTTCAGCAAGAACCTTATTGTTTATGGAATTGGACTTTTGGTGGGAAGTATACTTGGAGTAACTGCATATTTCACAACCAAAAAGGTAGGGCCACCTAAGAAGTTCTTATTTGGTTGGCTTGCTGGTGGGTTTGTGATGAGTGTGACATGGAGTTATATAATAGCTCAAGAGTTGGTGGGGTTGCTTGTTTCAATTGGGTACATATGTGGAATAAGTCCTTCTATACTAGGGCTAACAGTTATGGCTTGGGGGAACTCAATTGGGGATTTGATGACAAATTTAACTATGGCTTTAAATGGAGGACCAGAGGGTGCTCAAGTAGCCATATCAGGTTGCTATGCTGCTCCCATTTTCAATATCCTCATTGGTTTGGGTTTGTCTCTTGTCACTACTACATGGTCAGAGTACCCTCAACATGTTGTGATACCTACAGACCCTTATCTTTTGGAGACAATGGTGTTTTTGGTGGTTGGATTAGTTTGGGCACTTTTGGTTTTGATAAAAAGAGATATGAAGCTTGACACAGTCTTAGGAGGAGGGCTTTTGTTTCTTTACTTTCTTTCTCTGTTTTCAAGACTTATTCATACAGAAGGTCACTCTAATAGTCTAATCTTATGA 1698 0.4099 MAYAVFLNASFLLVMCSFMIIHFHTPQTEVVVVTKISAFGSSNEQECESLASLDDFKAKCLYLKSNDPCAPQGYIDYLYLFYCQIGSYPSLGYTLLFLWLLILFYLLANTTSQYFCPSLESMSKLLRLSPTIAGVTLLSLGNGACDVFSSLVSFQGSGTRSIGFNTVLGGVSFVSCVVVGTVSIAVRQKRVQIDKSAFLRDVYSLLLVLFTLFGILIFGKINVLGAVAFTMMYAVYVAIAYVSSTRCDQGGDAAETGGVGCGNGLNLPLLVGVKKEAIDCEENGGEEYGLNEEKYCCCMRYLMCKVPLYVLEMPLYMPRRLTIPVVSEERWSKVYAVFSVILAPLLMSFLWSSTYNGNSFFSKNLIVYGIGLLVGSILGVTAYFTTKKVGPPKKFLFGWLAGGFVMSVTWSYIIAQELVGLLVSIGYICGISPSILGLTVMAWGNSIGDLMTNLTMALNGGPEGAQVAISGCYAAPIFNILIGLGLSLVTTTWSEYPQHVVIPTDPYLLETMVFLVVGLVWALLVLIKRDMKLDTVLGGGLLFLYFLSLFSRLIHTEGHSNSLIL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0155 565 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 558 - -
Vra10g0155 565 PANTHER CATION CALCIUM EXCHANGER 1 558 - -
Vra10g0155 565 Pfam Sodium/calcium exchanger protein 400 550 IPR004837 GO:0016021|GO:0055085
Vra10g0155 565 Pfam Sodium/calcium exchanger protein 97 241 IPR004837 GO:0016021|GO:0055085
Vra10g0155 565 Gene3D - 128 267 IPR044880 -
Vra10g0155 565 Gene3D - 334 552 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0155 Vra-Chr10 4241895 4244196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0155 6 561 Antiporters AT5G17850 50.893 4.88e-163 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0155 K13754 - gmx:100813848 766.148