Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0154 ATGGAACATTCTCTTTCTCCTTTGTTGTCAAATCTTCAAAGCCTTTGGTTTTTTGTATGCTTAAAAGGCCTAATATCTAACTTGATTGAGAGATATTCAAAGAAACAAAGGCCAAAACTTCCCCCAGGTCCAAAGCCATGGCTTATGGTGGGCAACCTTCCTGAGATGCTTACAAAAAAACCTGTTCATCAATGGATACACAATCTTATGAAAGAAATGAACACTGAAATCGCATGTATCCGCCTAGGAAATACCTATGTTATCCCAGTCACATGTCCCACCATTGCCAGACAGTTTTTGAGTGAACAGGATGCAACTTTTGCATCAAGATCACTAACCACTTGCACTGATCTCGTTAGTAGCGGATATTTAACCACAATTTTAGTACCATTTGGGGACCAATGGAAGAAAATGAAGAAAATCTTAAGCAGTGCTTTGCTTTCCTCACAAAAGCACCTATGGCTCCATGACAGAAGGACTGAAGAAGCTGACAACCTTATTTTTTACGTCTATAACAAAAGCAAAACCGTGAACAATGGTGTTGCTGGCCTTGTGAACATTCGAAGTGTTGCAAGGCATTATTGTGGCAACGTTATCAGGAAAATTGTTTTCAATAAAAGGTATTTTGGGAAAGGTAGGAAAGATGGAGGCCCTAGTTTTGAGGAGGAAGAACATGTTGATTCTATTTTCGTTTTACTTAGGTATCTTTACGCTTTTTCTATTTCTGATTATATCCCATGCTTGAGGAAACTTGACTTGGATGGACACCAGAAGAATGTTAAGGAAGCTTTGAAAGTGATAAAGAAATATCATGATCCCATCGTTGAAGAAAGACTTAAACAATGGAATGATACACCAAAGATTGATGAACAGGACTGGCTTGATATTTTGATCTCCTTGAAAGATGCCAACAATAATCCATTATTGACATTGGAAGAAATTAATGCACAAATTGTGGAAATAATGATTGCAACAGTGGACAATCCATCAAATGCTTTTGAATGGGCACTCGCTGAAATGATAAACCAGCCAAATTTGCTCCAACGAGCCATTGAGGAATTGGACAGTGTGGTGGGGAAAGAGAGGTTGGTTCAAGAATCAGATATACCAAAACTCAACTATGTAAAGGCCTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATGGCACCTTTTATTCCTCCCCATGTCTCAATGAGTGATACAACTGTGGGAAATTACTTCATCCCTAAAGGTAGCCATGTAATACTAAGTAGAAGAGAACTTGGAAGAAACCCAAAAGTGTGGAAAGAACCCCTCAAATTTAAACCAGAACGTCACCTTAAGAGTGATAATGGGTCTAATGTAGTTTTGACAGAGCCAAATTTAAGGTTCATATCATTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTTACGCTTGGGACCACAATGACCGTGATGTTATTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCCAATGTTTCAAAAGTAAACCTAGGTGAGTCCAATGATGGTTTAAATCTTGCAGAGCCACTTATGGCAGTTGCTAAGCCCAGATTACCACCACAATTATATCACCTTTAA 1590 0.395 MEHSLSPLLSNLQSLWFFVCLKGLISNLIERYSKKQRPKLPPGPKPWLMVGNLPEMLTKKPVHQWIHNLMKEMNTEIACIRLGNTYVIPVTCPTIARQFLSEQDATFASRSLTTCTDLVSSGYLTTILVPFGDQWKKMKKILSSALLSSQKHLWLHDRRTEEADNLIFYVYNKSKTVNNGVAGLVNIRSVARHYCGNVIRKIVFNKRYFGKGRKDGGPSFEEEEHVDSIFVLLRYLYAFSISDYIPCLRKLDLDGHQKNVKEALKVIKKYHDPIVEERLKQWNDTPKIDEQDWLDILISLKDANNNPLLTLEEINAQIVEIMIATVDNPSNAFEWALAEMINQPNLLQRAIEELDSVVGKERLVQESDIPKLNYVKACAREAFRLHPMAPFIPPHVSMSDTTVGNYFIPKGSHVILSRRELGRNPKVWKEPLKFKPERHLKSDNGSNVVLTEPNLRFISFSTGRRGCPGVTLGTTMTVMLFARLLHGFTWTAPPNVSKVNLGESNDGLNLAEPLMAVAKPRLPPQLYHL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0154 529 Gene3D Cytochrome P450 32 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 15 527 - -
Vra10g0154 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vra10g0154 529 SUPERFAMILY Cytochrome P450 41 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 Pfam Cytochrome P450 41 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 527 - -
Vra10g0154 529 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g0154 529 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0154 Vra-Chr10 4225772 4228524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0154 8 527 Cytochrome P450 AT4G39950 53.935 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0154 - K14984 vra:106778952 932.169