Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0150 ATGTCTCTCTCCACATCTCTGTTCACTCGCTTCTTAAATCTAGGAAAATTCCAGTTCCTCGTCAGAATCAAAATGCCCTTTCTTAGAAGTTTTAGATTTAATCTCTTTTTAGTATATCTCTTAGCTACTTGGGTTCAAATCCAAACCAAAGTGGAAAGTTACGAATACAAAGTTGGAGATCTAGATTCCTGGGGGATCCCCATTTCATCAAATTCACAAGTCTATGAGAAATGGTCAAAATATCACAACCTCAAGATCGGTGATTCCCTCTTGTTTCTGTACCCACCAAGCCAAGATTCATTGATTCAAGTGACAGAGGAGTCCTACAAGAGCTGCAACCTTAAAGATCCAATCTTGTACATGAACAATGGGAACTCGTTGTTCAACATTACATCAGTAGGGGAGTTTTACTTCACCAGTGCAGAGTTTGGTCATTGCCAAAAGCATCAAAAACTTCACATAACTGTTGGAGTTGGAGGAAACACCGACACACTTTCTCCATCTTCACTGCCTCAATCTGCACCTTCTTATCCAACTGCTTTTGGCGACATTCCCATGTCTCCTAGTACTTCTTCAGCTCACCAAAATTTCAAATTATCACTCATAGTTACTGGGTTCTTTTTATATTTCCTAATGCTATGCAACCATTGA 651 0.3948 MSLSTSLFTRFLNLGKFQFLVRIKMPFLRSFRFNLFLVYLLATWVQIQTKVESYEYKVGDLDSWGIPISSNSQVYEKWSKYHNLKIGDSLLFLYPPSQDSLIQVTEESYKSCNLKDPILYMNNGNSLFNITSVGEFYFTSAEFGHCQKHQKLHITVGVGGNTDTLSPSSLPQSAPSYPTAFGDIPMSPSTSSAHQNFKLSLIVTGFFLYFLMLCNH* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0150 216 Gene3D - 54 166 IPR008972 -
Vra10g0150 216 Pfam Plastocyanin-like domain 73 149 IPR003245 GO:0009055
Vra10g0150 216 PANTHER BLUE COPPER PROTEIN 32 206 IPR039391 GO:0009055
Vra10g0150 216 PANTHER MAVICYANIN 32 206 - -
Vra10g0150 216 ProSiteProfiles Phytocyanin domain profile. 54 158 IPR003245 GO:0009055
Vra10g0150 216 SUPERFAMILY Cupredoxins 53 156 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0150 Vra-Chr10 4155099 4155960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0150 50 186 Phytocyanin Superfamily AT1G64640 64.493 1.21e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0150 - - vra:106775534 434.491