Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0121 ATGAGAAGAGAAATTCGAAGCGTCCAAAATCACTGCCTTAACATGCCTGTGACAGACTCAAATGAACCGCAGAATTTTGATGATAACATTCTTTTCCCCGTTGAAGAGATTGTACAATACCCATTGCCCGGATACGTGTCACCAACTTCAATAAGTTTTAGTCCTGATGATAGTTTAATCTCTTACTTGTTTAGTCCTGATCACTCTTTAAACAGAAAGATTTATGCTTTTGATCTGAAGACCAATGCACAAGAATTGTTATTTAGTCCCCCAGACGGTGGACTGGATGAAAGTAATATTTCTCCAGAAGAAAAGTTGAGGAGGGAGAGGTTGAGGGAGCGTGGTTTAGGCGTGACACGATATGAATGGGTGAAGACAAGCTCGAAAAGGAAAGCAGTCGTCGTGCCATTGCCTGCTGGGATTTATATTCAGGACCTTTCCCTTTCAAAACCAGAGCTCAAGCTTCCAAGTGTATCAGGTTCACCTATTATTGATCCACATCTCTCTCCAGATGGATCAATGCTTGCCTATGTAAGAGATTGTGAGTTGCATGTTCTGAATCTCTTGTCAAATGAATCAAAGCAGTTGACCCATGGGGCAAAGGAACATGGTTTGGTAAGTTCAACACTTGGTTGTCCTTTACTGTATATTCANGGGCTTGCAGAATACATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACAGTAAATATATTGCTTTCACCGAAGTTGATTCTTCTGAAATACCACTTTTTAGAATTATGCACCAAGGGAAGAGCTCAGTTGGTTTAGAGGCACAGGAAGACCACCCTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTGCGCCTTGGGGTTGTTGCAATAGCTGGAAGCTCCATTACTTGGATGGATCTTCAATGTGGGGGCACAGAACAGCAAAACAACGAGGAGGAATATTTGGCAAGAGTCAATTGGATGCATGGAAACATTCTCACCGCTCAGATCTTGAACAGATACCACACTAAAATAAAGATTGTTAAATTTGACATCAAAACAGGCAAAAAGAAAAATTTGTTAGTGGAAGAAAACAGCAATTGGATCAATATACACGACTGTTTCACACCTCTTGATAAAGGAGTTACCAAATTTTCAGGTGGATTTATCTGGGCTAGTGAAAAAACAGGATTTAGGCATCTTTATCTTCATGATGCAAACGGGGTTTGTTTAGGATCCATCACTGAAGGTGAATGGATGGTTGAGCAAATTGCCGGAGTGAATGAAGCTACAGGTCTAATATACTTTACTGGGACCTTAGATGGGCCCCTGGAGTCCAATTTGTATTGTACTAAACTTTTCATTGATGGAAGTCAACCACTTCAGGTCCCTGTCAGACTTACACACAGCAAGGGGAAGCACATTGTGGTCCTTGATCATCATATGCGAAATTTTGTTGATATTCATGATTCTCTTGGTTGTCCTCCTAGGGTGTTACTGTGCTCATTGGAAGATGGAAGTGTAATCAAGCCTTTATATGAGCAGTCATTTACAGTTCCAAGGTTCAAAAGGCTTCAACTTGAGGCACCAGAGATTATTGAAATACAGGCTAATGATGGCACTACATTGTATGGAGCTTTATATAAGCCTGATGCTTCAAGGTTTGGACCTCCACCTTACAAAACTATGATCAATGTTTATGGTGGTCCAAGTGTACAGCTTGTCAGTAACTCTTGGCTCAGTACAGTTGATCTGAGAGCACAATATTTGAGAAACCAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCAAGACGAGGGTTGAAATTCGAAAGCTATCTAAAACACAAACTCGGTCAAATTGATGCTGATGATCAGCTCACTGGAGCAGAGTGGCTTGTGAAACAAGGGCTTGCAAAAGCTGGTCACATAGGGTTGTATGGTTGGAGCTATGGCGGATATCTCTCTGCAATGACACTGTCGAGATATCCAGATTTCTTCAAGTGTGCAATAGCGGGCGCCCCTGTTACATCATGGGATGGATATGACACGTTTTACACAGAGAAGTACATGGGGTTGCCATCTGAAAACAAGTCAGGCTATGAAAGTGGTTCTGTTATGAACCAAGTGCACCAGTTGAAAGGGCGGTTGTTGCTTGTGCATGGCATGATTGATGAGAATGTTCACTTCAGGCACACTGCAAGGCTTATCAATGCTCTTGTGACAGCTGGAAAGCCATATGAGCTAATAGTTTTCCCAGATGAACGCCACATGCCGCGGCGTCACAGTGATCGAGTTTACATGGAAGGGAGGATGTGGGACTTCATTCAGAGGAATCTGTAA 2340 0.4214 MRREIRSVQNHCLNMPVTDSNEPQNFDDNILFPVEEIVQYPLPGYVSPTSISFSPDDSLISYLFSPDHSLNRKIYAFDLKTNAQELLFSPPDGGLDESNISPEEKLRRERLRERGLGVTRYEWVKTSSKRKAVVVPLPAGIYIQDLSLSKPELKLPSVSGSPIIDPHLSPDGSMLAYVRDCELHVLNLLSNESKQLTHGAKEHGLVSSTLGCPLLYIXGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLEAQEDHPYPFAGASNVKVRLGVVAIAGSSITWMDLQCGGTEQQNNEEEYLARVNWMHGNILTAQILNRYHTKIKIVKFDIKTGKKKNLLVEENSNWINIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYLHDANGVCLGSITEGEWMVEQIAGVNEATGLIYFTGTLDGPLESNLYCTKLFIDGSQPLQVPVRLTHSKGKHIVVLDHHMRNFVDIHDSLGCPPRVLLCSLEDGSVIKPLYEQSFTVPRFKRLQLEAPEIIEIQANDGTTLYGALYKPDASRFGPPPYKTMINVYGGPSVQLVSNSWLSTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESYLKHKLGQIDADDQLTGAEWLVKQGLAKAGHIGLYGWSYGGYLSAMTLSRYPDFFKCAIAGAPVTSWDGYDTFYTEKYMGLPSENKSGYESGSVMNQVHQLKGRLLLVHGMIDENVHFRHTARLINALVTAGKPYELIVFPDERHMPRRHSDRVYMEGRMWDFIQRNL* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0121 779 Pfam Prolyl oligopeptidase family 580 779 IPR001375 GO:0006508|GO:0008236
Vra10g0121 779 SUPERFAMILY alpha/beta-Hydrolases 527 779 IPR029058 -
Vra10g0121 779 Gene3D alpha/beta hydrolase 528 779 IPR029058 -
Vra10g0121 779 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 30 774 - -
Vra10g0121 779 SUPERFAMILY DPP6 N-terminal domain-like 47 516 - -
Vra10g0121 779 Gene3D - 33 519 - -
Vra10g0121 779 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 136 493 IPR002469 GO:0006508
Vra10g0121 779 PANTHER DIPEPTIDYL-PEPTIDASE 4-RELATED 30 774 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0121 466 777 Carbohydrate Esterase AT5G36210 23.457 1.91e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0121 K01278 - gmx:100812178 1455.27