Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0082 ATGACAGCTTTTACACCAATTGCTCTACAGTACTCATCTACATCATCTTTGCATTCTTTGCTACCTTCTTTAGAACCTACACGTGATCATAATTCATGGTGGGCGAAAGTGAGATCGTACAAATCCGCAGGAAAAAGATCACTTCAACAGAATATCACAAGGGGTTTGACAATCCAGAGTGCAGCCACAAAACCAGCAAAGTCTCCAGCTGAAGAAGACTGGAAGGTTAAGCGAGAATATCTGCTGCAAAAAAGGGTAAGAAGTGTGGATGCAAAGGAAGCTCTGCGGCTTCAAAAAGAAAATAAGTTTGTGATTCTAGACGTAAGGCCAGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCTATCAATGTGCAAATATACAGGCTTATAAAGGAGTGGACAGCATGGGACATTGCAAGACGTGCTGCATTTGCTTTTTTTGGTATTTTTTCCGGGACTGAAGAGAACCCTGAGTTCATCCAGACTGTTGAAGCAAAGTTGGATAAAAATGCAAAGATAATAGTAGCTTGCTCAGCTGGAGGTACATTGAAACCATCACAAAATCTGCCCGAAGGTCAACAATCAAGGTCTCTCATAGCAGCTTATTTGCTGGTCCTTAATGGATTCAGCAATGTCTTCCATCTTGAAGGTGGTCTTTACTCGTGGTTTAAAGAGGATCTGCCAAGTGTTTCAGAGGAGTAA 705 0.4213 MTAFTPIALQYSSTSSLHSLLPSLEPTRDHNSWWAKVRSYKSAGKRSLQQNITRGLTIQSAATKPAKSPAEEDWKVKREYLLQKRVRSVDAKEALRLQKENKFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFIQTVEAKLDKNAKIIVACSAGGTLKPSQNLPEGQQSRSLIAAYLLVLNGFSNVFHLEGGLYSWFKEDLPSVSEE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0082 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 84 229 IPR036873 -
Vra10g0082 234 SMART rhod_4 89 229 IPR001763 -
Vra10g0082 234 CDD RHOD 93 223 - -
Vra10g0082 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 16 234 IPR043186 -
Vra10g0082 234 ProSiteProfiles Rhodanese domain profile. 99 232 IPR001763 -
Vra10g0082 234 Gene3D - 84 233 IPR036873 -
Vra10g0082 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 16 234 - -
Vra10g0082 234 Pfam Rhodanese-like domain 91 224 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0082 1 229 Sulfurtransferasese or Rhodanese AT4G27700 66.522 2.16e-104 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0082 - - gmx:100788147 417.157