Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0068 ATGGGGATTCTCAGCGATCATCATCATAACTCTCCAAAACACCATCACCACCATCATTACCACATGAGCTTTCACTTGCACATTCCTCACCTCCACTTTCACCACCACCACCAGGAGAAGAAGGACCTCAAGGACGTTCCAAAAGGGTGTTTGGCGGTCTTGGTAGGCCAAGGGGAGGAGCAACAGAGGTTTGTCATCCCTGTCATGTACATGAACCACCCACTGTTCATGAAGTTGCTCAAGGAAGCCGAAGACGAATACGGCTTCCAGCAGAAAGGCCCCATCACCATCCCTTGCCACGTCGAGCACTTCCGCACCGTCCAAGGCATCATCGACAGGGAGAAATACCTCCACCACCACCACCACCACCATGCTTGGTGCTTCAAAGTTTGA 393 0.5191 MGILSDHHHNSPKHHHHHHYHMSFHLHIPHLHFHHHHQEKKDLKDVPKGCLAVLVGQGEEQQRFVIPVMYMNHPLFMKLLKEAEDEYGFQQKGPITIPCHVEHFRTVQGIIDREKYLHHHHHHHAWCFKV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0068 130 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 22 126 - -
Vra10g0068 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 126 IPR003676 GO:0009733
Vra10g0068 130 Pfam Auxin responsive protein 40 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0068 Vra-Chr10 2392209 2393169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0068 45 105 Calmodulin-binding Proteins AT5G20810 57.377 2.89e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0068 K14488 - gmx:100526867 185.652