Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0063 ATGGGTGAGTTTGGCGTTCCCCACACGAGAAAAAGAAGTAGCAGCAACAACAGTGGTGGTAGTGTTGTTGGGTTGGATGTGAGAGTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGTTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCGTCTACCTTCAAACCCTCAGTGGATGGTGGTTTCAATCTGAGGTTGGCTAGTGGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGTGAGCGCCATATGCACAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCGCCACTCCCACTAGCATCAATAACAATACTCACCAAATCAAGAGGCCTCGCCATGAGTGCAATCCTTTTCCTTCTATACCTGATGTAACCGTGGCCATTTCTAACCCCACATCTAGAAAACATGGACCTTCACCCCATTTTCTTCCCTCTTCCACCACACTGCCTTACCTTGAATCTCCCCTTTCTCTTGCTAACTTTGGTTACAAAGCTGCAAATTTGGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGACTGGATGCTGAACGGAGATCCTATTTCCCTGGGTGCTTCCGACTCAGAATGGCAGTCTCTGATGCATCACAAAGTTGGACTGAGCAGTGAGAGTTCTTGTAACAATCCCCAGCCTCAGTACTTGAATTCATTTACACTATACAACACTGGACTGGATCAACAGAACAGACGCCACCCTATGTTCCTGAATCCTCTGGTTGTTCCTATGGAAAACCTCCAAGCAGAGAAGCCAAGAGGTTTCATTGATGCTTGGTCCAACGCAGAAACTGGTGAAAACAATGGCACCAGCAACAGCAAGAACTCTACTGCATCAATCGGTAAATTGAGCCTTTCTTCTCTTGATCTATCAATGGGGGGTGGTGGTGTGAACGAAGATGTAGGTAATGTTAACATAGGGCTGGGCCTAATGGATACGAAAATCTCTCTGTCGAACTGGGTGAACCCTGCACCTTGGGTGGGTTCAACGCTTGGGGGTCCTCTAGCTGAAGTTCTAAGGTCAAGCACAGTGACTGCGACAACGAACGAAAGAAGCTCAAACACAGATGTTGAAAGTAACAGTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTGCTGCATCATCAAGGGCGAATTCTGAGATGGCCCTGCTGAGGTTTCAACCAAATGTAAATTAA 1521 0.4721 MGEFGVPHTRKRSSSNNSGGSVVGLDVRVQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPVIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKPSVDGGFNLRLASGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTATPTSINNNTHQIKRPRHECNPFPSIPDVTVAISNPTSRKHGPSPHFLPSSTTLPYLESPLSLANFGYKAANLDSMASVSANKEPRGLDWMLNGDPISLGASDSEWQSLMHHKVGLSSESSCNNPQPQYLNSFTLYNTGLDQQNRRHPMFLNPLVVPMENLQAEKPRGFIDAWSNAETGENNGTSNSKNSTASIGKLSLSSLDLSMGGGGVNEDVGNVNIGLGLMDTKISLSNWVNPAPWVGSTLGGPLAEVLRSSTVTATTNERSSNTDVESNSPSGVLQKTLVSLSDSSSNSSPRVAASSRANSEMALLRFQPNVN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0063 506 PANTHER - 120 492 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vra10g0063 506 PANTHER GROWTH-REGULATING FACTOR 7 120 492 - -
Vra10g0063 506 MobiDBLite consensus disorder prediction 183 199 - -
Vra10g0063 506 MobiDBLite consensus disorder prediction 9 23 - -
Vra10g0063 506 ProSiteProfiles WRC domain profile. 140 184 IPR014977 -
Vra10g0063 506 MobiDBLite consensus disorder prediction 447 466 - -
Vra10g0063 506 MobiDBLite consensus disorder prediction 172 203 - -
Vra10g0063 506 Pfam WRC 141 183 IPR014977 -
Vra10g0063 506 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0063 Vra-Chr10 2244576 2247628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0063 137 195 GRF Transcription Factor Family AT2G36400 74.576 5.05e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0063 - - gmx:100796948 707.597